Regulog sll5086 - Cyanobacteria

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum:	Cyanobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 2 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Microcystis aeruginosa NIES-843
Nostoc sp. PCC 7120
Trichodesmium erythraeum IMS101
Cyanothece sp. ATCC 51142
Cyanothece sp. PCC 7425
Cyanothece sp. PCC 8801
Gloeobacter violaceus PCC 7421
Synechococcus elongatus PCC 7942	1	1
Synechococcus sp. PCC 7002
Synechocystis sp. PCC 6803	1	1
Prochlorococcus marinus str. MIT 9313
Thermosynechococcus elongatus BP-1
Synechococcus sp. JA-3-3Ab
Synechococcus sp. WH 8102

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes															Function

CRON 1.
PF10025	Microcystis aeruginosa NIES-843	Nostoc sp. PCC 7120	Trichodesmium erythraeum IMS101	Cyanothece sp. ATCC 51142 Gene: cce_4458: hypothetical protein	Cyanothece sp. PCC 7425	Cyanothece sp. PCC 8801	Gloeobacter violaceus PCC 7421	Synechococcus elongatus PCC 7942	Synechococcus sp. PCC 7002	* Synechocystis sp. PCC 6803 Site: position = -576 score = 16.4664 sequence = ACAGTT-(19)-ACAGTT-(11)-AACTGT-(7)-ACAATT Gene: slr5087: hypothetical protein	Prochlorococcus marinus str. MIT 9313	Thermosynechococcus elongatus BP-1	Synechococcus sp. JA-3-3Ab	Synechococcus sp. WH 8102	hypothetical protein

CRON 2.
Cyan7425_2936	Microcystis aeruginosa NIES-843	Nostoc sp. PCC 7120	Trichodesmium erythraeum IMS101	Cyanothece sp. ATCC 51142	Cyanothece sp. PCC 7425 Gene: Cyan7425_2936: hypothetical protein	Cyanothece sp. PCC 8801	Gloeobacter violaceus PCC 7421	* Synechococcus elongatus PCC 7942 Site: position = -201 score = 16.124 sequence = ACAGTT-(19)-ACAGTT-(11)-AACTGT-(7)-GCAATT Gene: Synpcc7942_1724: hypothetical protein	Synechococcus sp. PCC 7002	Synechocystis sp. PCC 6803	Prochlorococcus marinus str. MIT 9313	Thermosynechococcus elongatus BP-1	Synechococcus sp. JA-3-3Ab	Synechococcus sp. WH 8102	hypothetical protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --