Regulog YrdX - Ralstonia
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | |
| Effector: | |
| Phylum: | Proteobacteria/Beta |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
| Genome | Genes | Operons |
|---|---|---|
| Cupriavidus taiwanensis | ||
| Ralstonia eutropha H16 | 7 | 1 |
| Ralstonia eutropha JMP134 | ||
| Ralstonia metallidurans CH34 | ||
| Ralstonia pickettii 12J | ||
| Ralstonia solanacearum GMI1000 |
| Genes | Function | ||||||
|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||
| h16_A1957 |
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Ralstonia eutropha H16 Site: position = -105 score = 4.62702 sequence = GTGGCACAT-(2)-GTTGCGGAT Site: position = -142 score = 6.54693 sequence = CTTGATTGG-(2)-ATTGATCGC Gene: H16_A1957: hypothetical protein |
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hypothetical protein |
| COG388 |
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Gene: H16_A1956: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (EC 3.5.5.7) |
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Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (EC 3.5.5.7) |
| COG2516 |
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Gene: H16_A1955: Biotin synthase-related radical SAM domain protein |
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Biotin synthase-related radical SAM domain protein |
| h16_A1954 |
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Gene: H16_A1954: GCN5-related N-acetyltransferase |
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GCN5-related N-acetyltransferase |
| COG2144 |
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Gene: H16_A1953: AIR synthase related protein/Selenophosphate synthetase-related |
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AIR synthase related protein/Selenophosphate synthetase-related |
| h16_A1952 |
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Gene: H16_A1952: hypothetical protein |
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hypothetical protein |
| trkA |
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Gene: H16_A1951: FAD dependent oxidoreductase |
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FAD dependent oxidoreductase |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |