Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog SO0193 - Shewanellaceae

Properties
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Fatty acid metabolism
Effector:
Phylum: Proteobacteria/gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 11 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Shewanella oneidensis MR-1 2 1
Shewanella putrefaciens CN-32 2 1
Shewanella sp W3-18-1 2 1
Shewanella sp ANA-3 2 1
Shewanella sp MR-4 2 1
Shewanella sp MR-7 2 1
Shewanella baltica OS155 2 1
Shewanella denitrificans OS217
Shewanella frigidimarina NCIMB 400 2 1
Shewanella amazonensis SB2B 2 1
Shewanella loihica PV-4 2 1
Shewanella pealeana ATCC 700345
Shewanella halifaxensis HAW-EB4
Shewanella piezotolerans WP3
Shewanella sediminis HAW-EB3
Shewanella woodyi ATCC 51908
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
SO0193
*
Shewanella oneidensis MR-1

Site:
position = -66
score = 6.15892
sequence = ATTTTGAACGTTGTTTTTTAT

Gene: SO_0193: fatty acid metabolism/phospholipid synthesis transcriptional regulator, TetR family
*
Shewanella putrefaciens CN-32

Site:
position = -66
score = 6.29699
sequence = ATTTTGAACATTGTTTTTTAT

Gene: Sputcn32_3546: fatty acid metabolism/phospholipid synthesis transcriptional regulator, TetR family
*
Shewanella sp W3-18-1

Site:
position = -66
score = 6.29699
sequence = ATTTTGAACATTGTTTTTTAT

Gene: Sputw3181_3683: fatty acid metabolism/phospholipid synthesis transcriptional regulator, TetR family
*
Shewanella sp ANA-3

Site:
position = -67
score = 5.08805
sequence = ATTTTGAACGTTGTTTTTTTA

Gene: Shewana3_0172: fatty acid metabolism/phospholipid synthesis transcriptional regulator, TetR family
*
Shewanella sp MR-4

Site:
position = -66
score = 6.15892
sequence = ATTTTGAACGTTGTTTTTTAT

Gene: Shewmr4_0172: fatty acid metabolism/phospholipid synthesis transcriptional regulator, TetR family
*
Shewanella sp MR-7

Site:
position = -66
score = 6.15892
sequence = ATTTTGAACGTTGTTTTTTAT

Gene: Shewmr7_0167: fatty acid metabolism/phospholipid synthesis transcriptional regulator, TetR family
*
Shewanella baltica OS155

Site:
position = -66
score = 6.15892
sequence = ATTTTGAACGTTGTTTTTTAT

Gene: Sbal_4185: fatty acid metabolism/phospholipid synthesis transcriptional regulator, TetR family
 
Shewanella denitrificans OS217
*
Shewanella frigidimarina NCIMB 400

Site:
position = -79
score = 6.11822
sequence = ATTGTGAACGTTGTTTTTTAT

Gene: Sfri_0121: fatty acid metabolism/phospholipid synthesis transcriptional regulator, TetR family
*
Shewanella amazonensis SB2B

Site:
position = -74
score = 6.30004
sequence = ATTGTGAACATTGTTTTTAAT

Site:
position = -96
score = 5.37325
sequence = TTAATAAACAGTGTTTTTTAT

Gene: Sama_0186: fatty acid metabolism/phospholipid synthesis transcriptional regulator, TetR family
*
Shewanella loihica PV-4

Site:
position = -70
score = 6.25629
sequence = ATTGTGAACATTGTTTTTTAT

Gene: Shew_0132: fatty acid metabolism/phospholipid synthesis transcriptional regulator, TetR family
 
Shewanella pealeana ATCC 700345
 
Shewanella halifaxensis HAW-EB4
 
Shewanella piezotolerans WP3
 
Shewanella sediminis HAW-EB3
 
Shewanella woodyi ATCC 51908
fatty acid metabolism/phospholipid synthesis transcriptional regulator, TetR family
lplT
 
Shewanella oneidensis MR-1

Gene: SO_0194: Lysophospholipid transporter LplT / 2-acylglycerophosphoethanolamine acyltransferase (EC 2.3.1.40) / Acyl-[acyl-carrier-protein] synthetase (EC 6.2.1.20)
 
Shewanella putrefaciens CN-32

Gene: Sputcn32_3545: Lysophospholipid transporter LplT / 2-acylglycerophosphoethanolamine acyltransferase (EC 2.3.1.40) / Acyl-[acyl-carrier-protein] synthetase (EC 6.2.1.20)
 
Shewanella sp W3-18-1

Gene: Sputw3181_3682: Lysophospholipid transporter LplT / 2-acylglycerophosphoethanolamine acyltransferase (EC 2.3.1.40) / Acyl-[acyl-carrier-protein] synthetase (EC 6.2.1.20)
 
Shewanella sp ANA-3

Gene: Shewana3_0173: Lysophospholipid transporter LplT / 2-acylglycerophosphoethanolamine acyltransferase (EC 2.3.1.40) / Acyl-[acyl-carrier-protein] synthetase (EC 6.2.1.20)
 
Shewanella sp MR-4

Gene: Shewmr4_0173: Lysophospholipid transporter LplT / 2-acylglycerophosphoethanolamine acyltransferase (EC 2.3.1.40) / Acyl-[acyl-carrier-protein] synthetase (EC 6.2.1.20)
 
Shewanella sp MR-7

Gene: Shewmr7_0168: Lysophospholipid transporter LplT / 2-acylglycerophosphoethanolamine acyltransferase (EC 2.3.1.40) / Acyl-[acyl-carrier-protein] synthetase (EC 6.2.1.20)
 
Shewanella baltica OS155

Gene: Sbal_4184: Lysophospholipid transporter LplT / 2-acylglycerophosphoethanolamine acyltransferase (EC 2.3.1.40) / Acyl-[acyl-carrier-protein] synthetase (EC 6.2.1.20)
 
Shewanella denitrificans OS217
 
Shewanella frigidimarina NCIMB 400

Gene: Sfri_0122: Lysophospholipid transporter LplT / 2-acylglycerophosphoethanolamine acyltransferase (EC 2.3.1.40) / Acyl-[acyl-carrier-protein] synthetase (EC 6.2.1.20)
 
Shewanella amazonensis SB2B

Gene: Sama_0187: Lysophospholipid transporter LplT / 2-acylglycerophosphoethanolamine acyltransferase (EC 2.3.1.40) / Acyl-[acyl-carrier-protein] synthetase (EC 6.2.1.20)
 
Shewanella loihica PV-4

Gene: Shew_0133: Lysophospholipid transporter LplT / 2-acylglycerophosphoethanolamine acyltransferase (EC 2.3.1.40) / Acyl-[acyl-carrier-protein] synthetase (EC 6.2.1.20)
 
Shewanella pealeana ATCC 700345

Gene: Spea_0159: Lysophospholipid transporter LplT / 2-acylglycerophosphoethanolamine acyltransferase (EC 2.3.1.40) / Acyl-[acyl-carrier-protein] synthetase (EC 6.2.1.20)
 
Shewanella halifaxensis HAW-EB4

Gene: Shal_4159: Lysophospholipid transporter LplT / 2-acylglycerophosphoethanolamine acyltransferase (EC 2.3.1.40) / Acyl-[acyl-carrier-protein] synthetase (EC 6.2.1.20)
 
Shewanella piezotolerans WP3

Gene: swp_0201: Lysophospholipid transporter LplT / 2-acylglycerophosphoethanolamine acyltransferase (EC 2.3.1.40) / Acyl-[acyl-carrier-protein] synthetase (EC 6.2.1.20)
 
Shewanella sediminis HAW-EB3

Gene: Ssed_4343: Lysophospholipid transporter LplT / 2-acylglycerophosphoethanolamine acyltransferase (EC 2.3.1.40) / Acyl-[acyl-carrier-protein] synthetase (EC 6.2.1.20)
 
Shewanella woodyi ATCC 51908

Gene: Swoo_4715: Lysophospholipid transporter LplT / 2-acylglycerophosphoethanolamine acyltransferase (EC 2.3.1.40) / Acyl-[acyl-carrier-protein] synthetase (EC 6.2.1.20)
Lysophospholipid transporter LplT / 2-acylglycerophosphoethanolamine acyltransferase (EC 2.3.1.40) / Acyl-[acyl-carrier-protein] synthetase (EC 6.2.1.20)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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