Regulog OapR - Ralstonia
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Gamma-aminobutyrate utilization |
| Effector: | |
| Phylum: | Proteobacteria/Beta |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Ralstonia
- By TF family - GntR/MocR
- By pathway - Gamma-aminobutyrate utilization
| Genome | Genes | Operons |
|---|---|---|
| Cupriavidus taiwanensis | 2 | 1 |
| Ralstonia eutropha H16 | 2 | 1 |
| Ralstonia eutropha JMP134 | 2 | 1 |
| Ralstonia metallidurans CH34 | 2 | 1 |
| Ralstonia pickettii 12J | 2 | 1 |
| Ralstonia solanacearum GMI1000 | 2 | 1 |
| Genes | Function | ||||||
|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||
| oapT |
*
Cupriavidus taiwanensis Site: position = -156 score = 14.1547 sequence = GCCTGTACGGTC-(11)-AACTGTACGGTA-(15)-GACTGTATATTT Gene: RALTA_A0212: Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18), PLP dependent |
*
Ralstonia eutropha H16 Site: position = -161 score = 14.2628 sequence = GCCTGTACGGTT-(11)-AACTGCACGGTA-(15)-GACTGTATATTT Gene: H16_A0272: Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18), PLP dependent |
*
Ralstonia eutropha JMP134 Site: position = -171 score = 14.5759 sequence = TCCTGTACGGTT-(11)-AACTGTACGGTA-(15)-GACTGTATATTT Gene: Reut_A0248: Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18), PLP dependent |
*
Ralstonia metallidurans CH34 Site: position = -166 score = 13.2971 sequence = ACCTGTACGGTT-(11)-AACTGTACGGTA-(15)-GACCGTATATTC Gene: Rmet_0205: Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18), PLP dependent |
*
Ralstonia pickettii 12J Site: position = -125 score = 14.3337 sequence = GCCTATACAGTT-(15)-ATCTGTGCATGT-(15)-CTCTGTACAGTT Gene: Rpic_4273: Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18), PLP dependent |
*
Ralstonia solanacearum GMI1000 Site: position = -114 score = 14.4369 sequence = ACCTATACAGTT-(15)-ATCTGTGCATGT-(15)-CTCTGTACAGTT Gene: RS02393: Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18), PLP dependent |
Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18), PLP dependent |
| oapD |
Gene: RALTA_A0213: Predicted NAD-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.16) |
Gene: H16_A0273: Predicted NAD-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.16) |
Gene: Reut_A0249: Predicted NAD-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.16) |
Gene: Rmet_0206: Predicted NAD-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.16) |
Gene: Rpic_4274: Predicted NAD-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.16) |
Gene: RS02392: Predicted NAD-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.16) |
Predicted NAD-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.16) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |