Regulog PdxW2 - Oceanospirillales/Alteromonadales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Pyridoxine/pyridoxal homeostasis |
| Effector: | Pyridoxal-5-phosphate |
| Phylum: | Proteobacteria/Gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Oceanospirillales/Alteromonadales
- By TF family - GntR/MocR
- By effector - Pyridoxal-5-phosphate
- By pathway - Pyridoxine/pyridoxal homeostasis
| Genome | Genes | Operons |
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| Alcanivorax borkumensis SK2 | ||
| Chromohalobacter salexigens DSM 3043 | 3 | 1 |
| Hahella chejuensis KCTC 2396 | ||
| Marinomonas sp. MWYL1 | ||
| Oceanobacter sp. RED65 | ||
| Oceanospirillum sp. MED92 | ||
| Reinekea sp. MED297 | ||
| Marinobacter aqueolei | ||
| Marinobacter sp. ELB17 | ||
| Teredinibacter turnerae T7901 | ||
| Saccharophagus degradans 2-40 | ||
| Cellvibrio japonicus Ueda107 |
| Genes | Function | ||||||||||||
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| CRON 1. | |||||||||||||
| PF00583 |
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Chromohalobacter salexigens DSM 3043 Site: position = -94 score = 12.3062 sequence = ACTGGTTCCCC-(13)-ACTGGTTCTTC-(2)-GGGGAACCATT Gene: Csal_1153: GCN5-related N-acetyltransferase domain |
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GCN5-related N-acetyltransferase domain |
| PF00583 |
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Gene: Csal_1154: GCN5-related N-acetyltransferase domain |
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GCN5-related N-acetyltransferase domain |
| pdxO2 |
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Gene: Csal_1155: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
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Gene: Mmwyl1_0134: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
Gene: RED65_10849: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
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Gene: Maqu_2930: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
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Gene: TERTU_4601: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
Gene: Sde_3707: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
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Pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |