Regulog PdxW - Ralstonia

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Pyridoxine/pyridoxal homeostasis
Effector:	Pyridoxal-5-phosphate
Phylum:	Proteobacteria/Beta
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 3 sites [see more]

Member of regulog collections

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes							Function

CRON 1.
pdxO	Cupriavidus taiwanensis	Ralstonia eutropha H16	Ralstonia eutropha JMP134	Ralstonia metallidurans CH34	* Ralstonia pickettii 12J Site: position = -92 score = 11.4687 sequence = CGTGGCTCCAA-(13)-GATGGGTCTAC-(2)-ATGGTGCCACG Gene: Rpic_3402: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	* Ralstonia solanacearum GMI1000 Site: position = -96 score = 10.5274 sequence = TGTGGCTCCAT-(13)-TGTGGGTCTAC-(2)-ATGGTGCCATG Gene: RS00575: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	Pyridoxamine 5'-phosphate oxidase-related, FMN-binding

CRON 2.
PF00583	Cupriavidus taiwanensis	Ralstonia eutropha H16	Ralstonia eutropha JMP134	Ralstonia metallidurans CH34	* Ralstonia pickettii 12J Site: position = -98 score = 11.1683 sequence = TGTGGCTCTAT-(13)-CATGGCTCTTT-(2)-ATGGGGCCAGA Gene: Rpic_4033: GCN5-related N-acetyltransferase (GNAT) domain	Ralstonia solanacearum GMI1000	GCN5-related N-acetyltransferase (GNAT) domain

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --