Regulog PdxW - Alteromonadales

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Pyridoxine/pyridoxal homeostasis
Effector:	Pyridoxal-5-phosphate
Phylum:	Proteobacteria/Gamma
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 2 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Idiomarina loihiensis L2TR
Idiomarina baltica OS145
Glaciecola sp. HTCC2999
Colwellia psychrerythraea 34H	2	1
Alteromonas macleodii 'Deep ecotype'
Alteromonadales bacterium TW-7
Pseudoalteromonas tunicata D2	2	1
Pseudoalteromonas haloplanktis TAC125
Pseudoalteromonas atlantica T6c

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes										Function

CRON 1.
PF00583	Idiomarina loihiensis L2TR	Idiomarina baltica OS145	Glaciecola sp. HTCC2999	* Colwellia psychrerythraea 34H Site: position = -105 score = 12.6476 sequence = TCTGGTCTA-(14)-TCTGGTTGT-(6)-TATACCAAA Gene: CPS_3936: GCN5-related N-acetyltransferase domain	Alteromonas macleodii 'Deep ecotype'	Alteromonadales bacterium TW-7	* Pseudoalteromonas tunicata D2 Site: position = -89 score = 12.8244 sequence = TTTGGTCTA-(14)-ACTGGTTGT-(6)-TATACCAGA Gene: PTD2_06329: GCN5-related N-acetyltransferase domain	Pseudoalteromonas haloplanktis TAC125	Pseudoalteromonas atlantica T6c	GCN5-related N-acetyltransferase domain
pdxO2	Idiomarina loihiensis L2TR	Idiomarina baltica OS145	Glaciecola sp. HTCC2999	Colwellia psychrerythraea 34H Gene: CPS_3937: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	Alteromonas macleodii 'Deep ecotype'	Alteromonadales bacterium TW-7	Pseudoalteromonas tunicata D2 Gene: PTD2_06324: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	Pseudoalteromonas haloplanktis TAC125	Pseudoalteromonas atlantica T6c	Pyridoxamine 5'-phosphate oxidase-related, FMN-binding

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --