Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog Mmwyl1_4437 - Oceanospirillales/Alteromonadales

Properties
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/Gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 1 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Alcanivorax borkumensis SK2
Chromohalobacter salexigens DSM 3043
Hahella chejuensis KCTC 2396
Marinomonas sp. MWYL1 2 1
Oceanobacter sp. RED65
Oceanospirillum sp. MED92
Reinekea sp. MED297
Marinobacter aqueolei
Marinobacter sp. ELB17
Saccharophagus degradans 2-40
Teredinibacter turnerae T7901
Cellvibrio japonicus Ueda107
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
COG0235
 
Alcanivorax borkumensis SK2
 
Chromohalobacter salexigens DSM 3043
 
Hahella chejuensis KCTC 2396
*
Marinomonas sp. MWYL1

Site:
position = -95
score = 14.5627
sequence = ATCTGGACCA-(13)-ATCTGGATGT-(6)-TGGTCCAGAT

Gene: Mmwyl1_4438: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
 
Oceanobacter sp. RED65
 
Oceanospirillum sp. MED92
 
Reinekea sp. MED297
 
Marinobacter aqueolei
 
Marinobacter sp. ELB17
 
Saccharophagus degradans 2-40
 
Teredinibacter turnerae T7901
 
Cellvibrio japonicus Ueda107
Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
COG0329
 
Alcanivorax borkumensis SK2
 
Chromohalobacter salexigens DSM 3043
 
Hahella chejuensis KCTC 2396
 
Marinomonas sp. MWYL1

Gene: Mmwyl1_4439: Dihydrodipicolinate synthetase
 
Oceanobacter sp. RED65
 
Oceanospirillum sp. MED92
 
Reinekea sp. MED297
 
Marinobacter aqueolei
 
Marinobacter sp. ELB17

Gene: MELB17_01285: Dihydrodipicolinate synthetase
 
Saccharophagus degradans 2-40
 
Teredinibacter turnerae T7901
 
Cellvibrio japonicus Ueda107
Dihydrodipicolinate synthetase
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD