Regulog CPS_4612 - Alteromonadales

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Metabolite transport
Effector:
Phylum:	Proteobacteria/Gamma
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 3 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Alteromonadales bacterium TW-7
Alteromonas macleodii 'Deep ecotype'
Colwellia psychrerythraea 34H	1	1
Glaciecola sp. HTCC2999
Idiomarina baltica OS145
Idiomarina loihiensis L2TR
Pseudoalteromonas tunicata D2	1	1
Pseudoalteromonas haloplanktis TAC125	1	1
Pseudoalteromonas atlantica T6c

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes										Function

CRON 1.
PF00892	Alteromonadales bacterium TW-7	Alteromonas macleodii 'Deep ecotype'	* Colwellia psychrerythraea 34H Site: position = -370 score = 8.41906 sequence = AACTGTATAGG-(14)-TTTTGTATATG Gene: CPS_4613: Permease of the drug/metabolite transporter (DMT) superfamily	Glaciecola sp. HTCC2999	Idiomarina baltica OS145	Idiomarina loihiensis L2TR	* Pseudoalteromonas tunicata D2 Site: position = -96 score = 9.67516 sequence = ATCTGTATAGG-(14)-ATCTGTATATG Gene: PTD2_06135: Permease of the drug/metabolite transporter (DMT) superfamily	* Pseudoalteromonas haloplanktis TAC125 Site: position = -91 score = 9.37147 sequence = ATCTGTATAGG-(14)-TTCTGTATATG Gene: PSHAa0058: Permease of the drug/metabolite transporter (DMT) superfamily	Pseudoalteromonas atlantica T6c Gene: Patl_2211: Permease of the drug/metabolite transporter (DMT) superfamily	Permease of the drug/metabolite transporter (DMT) superfamily

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --