Regulog PdxW - Rhizobiales

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Pyridoxine/pyridoxal homeostasis
Effector:	Pyridoxal-5-phosphate
Phylum:	Proteobacteria/Alpha
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 4 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Agrobacterium tumefaciens str. C58 (Cereon)
Azorhizobium caulinodans ORS 571	1	1
Bartonella quintana str. Toulouse
Bradyrhizobium japonicum USDA 110	1	1
Bradyrhizobium sp. BTAi1	1	1
Brucella melitensis 16M
Mesorhizobium loti MAFF303099	1	1
Mesorhizobium sp. BNC1
Nitrobacter winogradskyi Nb-255
Rhizobium etli CFN 42
Rhizobium leguminosarum bv. viciae 3841
Rhizobium sp. NGR234
Rhodopseudomonas palustris CGA009
Sinorhizobium meliloti 1021
Xanthobacter autotrophicus Py2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes																Function

CRON 1.
pdxO	Agrobacterium tumefaciens str. C58 (Cereon)	* Azorhizobium caulinodans ORS 571 Site: position = -90 score = 9.64453 sequence = GATTGGTC-(16)-TATTGGAT-(9)-GTCCAATC Gene: AZC_0404: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein	Bartonella quintana str. Toulouse	* Bradyrhizobium japonicum USDA 110 Site: position = -97 score = 12.5419 sequence = AATTGGTC-(16)-AATTGGCA-(8)-GACCAAAT Gene: blr4155: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein	* Bradyrhizobium sp. BTAi1 Site: position = -86 score = 12.2364 sequence = AAGTGGTT-(16)-AAGTGGAA-(8)-AACCACTT Gene: BBta_6495: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein	Brucella melitensis 16M	* Mesorhizobium loti MAFF303099 Site: position = -57 score = 11.3166 sequence = GATTGGTC-(16)-GATTGGTT-(8)-GACCAATG Gene: mll1820: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009 Gene: RPA1393: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --