Regulog PdxQ - Comamonadaceae

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Pyridoxine/pyridoxal homeostasis
Effector:	Pyridoxal-5-phosphate
Phylum:	Proteobacteria/Beta
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 1 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Acidovorax avenae subsp. citrulli AAC00-1
Acidovorax sp. JS42
Comamonas testosteroni KF-1
Delftia acidovorans SPH-1	1	1
Leptothrix cholodnii SP-6
Methylibium petroleiphilum PM1
Polaromonas naphthalenivorans CJ2
Polaromonas sp. JS666
Rhodoferax ferrireducens DSM 15236
Variovorax paradoxus S110
Verminephrobacter eiseniae EF01-2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes												Function

CRON 1.
pdxO2	Acidovorax avenae subsp. citrulli AAC00-1 Gene: Aave_4171: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	Acidovorax sp. JS42 Gene: Ajs_2440: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	Comamonas testosteroni KF-1 Gene: CtesDRAFT_1041: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	* Delftia acidovorans SPH-1 Site: position = -49 score = 12.8456 sequence = AACTGGTCTGC-(13)-AACTGGATTTT-(3)-TTGTGCCAGGG Gene: Daci_2223: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	2 Leptothrix cholodnii SP-6 Gene: Lcho_0027: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding Gene: Lcho_4337: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	Methylibium petroleiphilum PM1 Gene: Mpe_A2039: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	Polaromonas naphthalenivorans CJ2 Gene: Pnap_3744: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	Polaromonas sp. JS666	Rhodoferax ferrireducens DSM 15236 Gene: Rfer_3387: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	Variovorax paradoxus S110 Gene: Vapar_6076: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	Verminephrobacter eiseniae EF01-2	Pyridoxamine 5'-phosphate oxidase-related, FMN-binding

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --