Regulog PdxQ - Alcaligenaceae
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Pyridoxine/pyridoxal homeostasis |
| Effector: | Pyridoxal-5-phosphate |
| Phylum: | Proteobacteria/Beta |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Alcaligenaceae
- By TF family - GntR/MocR
- By effector - Pyridoxal-5-phosphate
- By pathway - Pyridoxine/pyridoxal homeostasis
| Genome | Genes | Operons |
|---|---|---|
| Bordetella avium 197N | ||
| Bordetella bronchiseptica RB50 | ||
| Bordetella petrii DSM 12804 | 1 | 1 |
| Genes | Function | |||
|---|---|---|---|---|
| CRON 1. | ||||
| pdxO2 |
Gene: BAV0459: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
Gene: BB2357: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
*
Bordetella petrii DSM 12804 Site: position = -108 score = 13.7156 sequence = ATCTGGCCCAT-(13)-AACTGGTTCTT-(4)-TTGTGCCTGTT Gene: Bpet0244: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |