Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog PdxQ - Ralstonia

Properties
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process: Pyridoxine/pyridoxal homeostasis
Effector: Pyridoxal-5-phosphate
Phylum: Proteobacteria/Beta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 2 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Cupriavidus taiwanensis 2 1
Ralstonia eutropha H16 2 1
Ralstonia eutropha JMP134
Ralstonia metallidurans CH34
Ralstonia pickettii 12J
Ralstonia solanacearum GMI1000
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
pdxO2
*
Cupriavidus taiwanensis

Site:
position = -93
score = 14.8208
sequence = AACTGGCCCAT-(13)-AACTGGACCTT-(4)-TTGTGCCAGTT

Gene: RALTA_B0827: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding
*
Ralstonia eutropha H16

Site:
position = -94
score = 14.2531
sequence = GACTGGCCCAT-(13)-AACCGGACCTT-(4)-TTGTGCCAGTT

Gene: H16_B1978: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding
 
Ralstonia eutropha JMP134
 
Ralstonia metallidurans CH34

Gene: Rmet_4524: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding
 
Ralstonia pickettii 12J

Gene: Rpic_4536: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding
 
Ralstonia solanacearum GMI1000

Gene: RS01760: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding
PF01810
 
Cupriavidus taiwanensis

Gene: RALTA_B0826: Lysine-type exporter protein (LYSE/YGGA)
 
Ralstonia eutropha H16

Gene: H16_B1979: Lysine-type exporter protein (LYSE/YGGA)
 
Ralstonia eutropha JMP134
 
Ralstonia metallidurans CH34
 
Ralstonia pickettii 12J
 2
Ralstonia solanacearum GMI1000

Gene: RS04781: Lysine-type exporter protein (LYSE/YGGA)

Gene: RS05656: Lysine-type exporter protein (LYSE/YGGA)
Lysine-type exporter protein (LYSE/YGGA)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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