Regulog PdxQ - Rhizobiales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Pyridoxine/pyridoxal homeostasis |
| Effector: | Pyridoxal-5-phosphate |
| Phylum: | Proteobacteria/Alpha |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhizobiales
- By TF family - GntR/MocR
- By effector - Pyridoxal-5-phosphate
- By pathway - Pyridoxine/pyridoxal homeostasis
| Genome | Genes | Operons |
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| Agrobacterium tumefaciens str. C58 (Cereon) | ||
| Azorhizobium caulinodans ORS 571 | ||
| Bartonella quintana str. Toulouse | ||
| Bradyrhizobium japonicum USDA 110 | ||
| Bradyrhizobium sp. BTAi1 | ||
| Brucella melitensis 16M | ||
| Mesorhizobium loti MAFF303099 | 5 | 2 |
| Mesorhizobium sp. BNC1 | ||
| Nitrobacter winogradskyi Nb-255 | ||
| Rhizobium etli CFN 42 | ||
| Rhizobium leguminosarum bv. viciae 3841 | ||
| Rhizobium sp. NGR234 | ||
| Rhodopseudomonas palustris CGA009 | ||
| Sinorhizobium meliloti 1021 | ||
| Xanthobacter autotrophicus Py2 |
| Genes | Function | |||||||||||||||
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| CRON 1. | ||||||||||||||||
| pdxO2 |
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Mesorhizobium loti MAFF303099 Site: position = -87 score = 12.855 sequence = AACTGGACTAC-(13)-GACTGGCTGTT-(4)-ATAGGCCAGCT Gene: mlr6176: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
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Pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
| PF01810 |
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Gene: mlr6177: Lysine-type exporter protein (LYSE/YGGA) |
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Lysine-type exporter protein (LYSE/YGGA) |
| CRON 2. | ||||||||||||||||
| COG3382 |
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Mesorhizobium loti MAFF303099 Site: position = -141 score = 10.6392 sequence = TACTGGACCAA-(13)-AAGTGGCAGTT-(4)-TTGGACCAGTG Gene: mll6378: hypothetical protein |
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hypothetical protein |
| PF01810 |
Gene: Atu4268: Lysine-type exporter protein (LYSE/YGGA) |
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Gene: mll6377: Lysine-type exporter protein (LYSE/YGGA) |
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Gene: RL3247A: Lysine-type exporter protein (LYSE/YGGA) |
Gene: NGR_b00150: Lysine-type exporter protein (LYSE/YGGA) |
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Lysine-type exporter protein (LYSE/YGGA) |
| PF00701 |
Gene: Atu0899: Dihydrodipicolinate synthase |
Gene: AZC_2692: Dihydrodipicolinate synthase |
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Gene: mll6376: Dihydrodipicolinate synthase |
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Gene: Nwi_0883: Dihydrodipicolinate synthase |
Gene: RHE_CH02792: Dihydrodipicolinate synthase |
Gene: RL3247: Dihydrodipicolinate synthase |
Gene: NGR_b00160: Dihydrodipicolinate synthase |
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Gene: SMb21508: Dihydrodipicolinate synthase |
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Dihydrodipicolinate synthase |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |