Regulog HisR - Xanthomonadales
| Regulator type: | Transcription factor |
| Regulator family: | TrpR |
| Regulation mode: | repressor |
| Biological process: | Histidine biosynthesis |
| Effector: | Histidine |
| Phylum: | Proteobacteria/Gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - HisR
- By taxonomy - Xanthomonadales
- By TF family - TrpR
- By effector - Histidine
- By pathway - Histidine biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Stenotrophomonas maltophilia K279a | 9 | 2 |
| Xanthomonas axonopodis pv. citri str. 306 | 9 | 2 |
| Xanthomonas campestris pv. campestris str. ATCC 33913 | 9 | 2 |
| Xylella fastidiosa 9a5c | 9 | 2 |
| Genes | Function | ||||
|---|---|---|---|---|---|
| CRON 1. | |||||
| hisR |
*
Stenotrophomonas maltophilia K279a Site: position = -23 score = 7.15633 sequence = TGTACTAACGCGCTATTACA Gene: Smlt2161: Predicted histidine repressor, TrpR family |
*
Xanthomonas axonopodis pv. citri str. 306 Site: position = -28 score = 7.27186 sequence = TGTACTAACACGCTATTACA Gene: XAC1827: Predicted histidine repressor, TrpR family |
*
Xanthomonas campestris pv. campestris str. ATCC 33913 Site: position = -28 score = 7.27186 sequence = TGTACTAACACGCTATTACA Gene: XCC1807: Predicted histidine repressor, TrpR family |
*
Xylella fastidiosa 9a5c Site: position = -27 score = 6.21314 sequence = TGTAATAGTTCGCTATATCA Gene: XF2221: Predicted histidine repressor, TrpR family |
Predicted histidine repressor, TrpR family |
| CRON 2. | |||||
| hisG |
*
Stenotrophomonas maltophilia K279a Site: position = -384 score = 7.15633 sequence = TGTACTAACGCGCTATTACA Gene: Smlt2162: ATP phosphoribosyltransferase (EC 2.4.2.17) |
*
Xanthomonas axonopodis pv. citri str. 306 Site: position = -364 score = 7.27186 sequence = TGTACTAACACGCTATTACA Gene: XAC1828: ATP phosphoribosyltransferase (EC 2.4.2.17) |
*
Xanthomonas campestris pv. campestris str. ATCC 33913 Site: position = -364 score = 7.27186 sequence = TGTACTAACACGCTATTACA Gene: XCC1808: ATP phosphoribosyltransferase (EC 2.4.2.17) |
*
Xylella fastidiosa 9a5c Site: position = -362 score = 6.21314 sequence = TGTAATAGTTCGCTATATCA Gene: XF2220: ATP phosphoribosyltransferase (EC 2.4.2.17) |
ATP phosphoribosyltransferase (EC 2.4.2.17) |
| hisD |
Gene: Smlt2163: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: XAC1829: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: XCC1809: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: XF2219: Histidinol dehydrogenase (EC 1.1.1.23) |
Histidinol dehydrogenase (EC 1.1.1.23) |
| hisC |
Gene: Smlt2164: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: XAC1830: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: XCC1810: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: XF2218: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
| hisB |
Gene: Smlt2165: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: XAC1831: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: XCC1811: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: XF2217: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
| hisH |
Gene: Smlt2166: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: XAC1832: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: XCC1812: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: XF2216: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
| hisA |
Gene: Smlt2167: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: XAC1833: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: XCC1813: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: XF2215: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
| hisF |
Gene: Smlt2168: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: XAC1834: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: XCC1814: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: XF2214: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
| hisIE |
Gene: Smlt2169: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: XAC1835: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: XCC1815: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: XF2213: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |