Regulog HisR - Listeriaceae
| Regulator type: | Transcription factor |
| Regulator family: | TrpR |
| Regulation mode: | repressor |
| Biological process: | Histidine biosynthesis |
| Effector: | Histidine |
| Phylum: | Firmicutes |
| Visualization: | |
|
Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Listeriaceae
- By trascription factor - HisR
- By TF family - TrpR
- By effector - Histidine
- By pathway - Histidine biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Listeria innocua Clip11262 | 10 | 2 |
| Listeria monocytogenes EGD-e | 10 | 2 |
| Listeria seeligeri serovar 1/2b str. SLCC3954 | 10 | 2 |
| Listeria welshimeri serovar 6b str. SLCC5334 | 10 | 2 |
| Genes | Function | ||||
|---|---|---|---|---|---|
| CRON 1. | |||||
| hisJ |
*
Listeria innocua Clip11262 Site: position = -116 score = 6.14584 sequence = CATATTAGCACGTTAAAGTG Gene: lin0579: Histidinol-phosphatase (EC 3.1.3.15) |
*
Listeria monocytogenes EGD-e Site: position = -116 score = 6.06868 sequence = CATATTAGCACGTTAAAGCG Gene: lmo0570: Histidinol-phosphatase (EC 3.1.3.15) |
*
Listeria seeligeri serovar 1/2b str. SLCC3954 Site: position = -107 score = 6.06868 sequence = CATATTAGCACGTTAAAGCG Gene: lse_0478: Histidinol-phosphatase (EC 3.1.3.15) |
*
Listeria welshimeri serovar 6b str. SLCC5334 Site: position = -104 score = 5.78764 sequence = CATATTAGCACGTTAAAGCA Gene: lwe0536: Histidinol-phosphatase (EC 3.1.3.15) |
Histidinol-phosphatase (EC 3.1.3.15) |
| CRON 2. | |||||
| hisZ |
*
Listeria innocua Clip11262 Site: position = -55 score = 6.14584 sequence = CACTTTAACGTGCTAATATG Gene: lin0578: ATP phosphoribosyltransferase regulatory subunit (EC 2.4.2.17) |
*
Listeria monocytogenes EGD-e Site: position = -55 score = 6.06868 sequence = CGCTTTAACGTGCTAATATG Gene: lmo0569: ATP phosphoribosyltransferase regulatory subunit (EC 2.4.2.17) |
*
Listeria seeligeri serovar 1/2b str. SLCC3954 Site: position = -54 score = 6.06868 sequence = CGCTTTAACGTGCTAATATG Gene: lse_0477: ATP phosphoribosyltransferase regulatory subunit (EC 2.4.2.17) |
*
Listeria welshimeri serovar 6b str. SLCC5334 Site: position = -55 score = 5.78764 sequence = TGCTTTAACGTGCTAATATG Gene: lwe0535: ATP phosphoribosyltransferase regulatory subunit (EC 2.4.2.17) |
ATP phosphoribosyltransferase regulatory subunit (EC 2.4.2.17) |
| hisG |
Gene: lin0577: ATP phosphoribosyltransferase catalytic subunit (EC 2.4.2.17) |
Gene: lmo0568: ATP phosphoribosyltransferase catalytic subunit (EC 2.4.2.17) |
Gene: lse_0476: ATP phosphoribosyltransferase catalytic subunit (EC 2.4.2.17) |
Gene: lwe0534: ATP phosphoribosyltransferase catalytic subunit (EC 2.4.2.17) |
ATP phosphoribosyltransferase catalytic subunit (EC 2.4.2.17) |
| hisD |
Gene: lin0576: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: lmo0567: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: lse_0475: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: lwe0533: Histidinol dehydrogenase (EC 1.1.1.23) |
Histidinol dehydrogenase (EC 1.1.1.23) |
| hisB |
Gene: lin0575: Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: lmo0566: Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: lse_0474: Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: lwe0532: Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
| hisH |
Gene: lin0574: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: lmo0565: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: lse_0473: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: lwe0531: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
| hisA |
Gene: lin0573: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: lmo0564: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: lse_0472: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: lwe0530: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
| hisF |
Gene: lin0572: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: lmo0563: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: lse_0471: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: lwe0529: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
| hisI |
Gene: lin0571: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) |
Gene: lmo0562: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) |
Gene: lse_0470: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) |
Gene: lwe0528: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) |
Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) |
| hisE |
Gene: lin0570: Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: lmo0561: Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: lse_0469: Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: lwe0527: Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |