Regulog HmgQ - Pseudomonadaceae
| Regulator type: | Transcription factor |
| Regulator family: | LysR |
| Regulation mode: | activator |
| Biological process: | Tyrosine degradation |
| Effector: | 4-hydroxyphenylpyruvate |
| Phylum: | Proteobacteria/Gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Pseudomonadaceae
- By TF family - LysR
- By effector - 4-hydroxyphenylpyruvate
- By pathway - Tyrosine degradation
| Genome | Genes | Operons |
|---|---|---|
| Azotobacter vinelandii AvOP | 5 | 2 |
| Pseudomonas aeruginosa PAO1 | ||
| Pseudomonas entomophila L48 | ||
| Pseudomonas fluorescens Pf-5 | ||
| Pseudomonas mendocina ymp | ||
| Pseudomonas putida KT2440 | ||
| Pseudomonas stutzeri A1501 | ||
| Pseudomonas syringae pv. tomato str. DC3000 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| hpd |
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Azotobacter vinelandii AvOP Site: position = -126 score = 5.96055 sequence = ATCTATTTTTTAGAT Gene: Avin_50170: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) |
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Gene: PST_0869: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) |
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4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) |
| gloA |
Gene: Avin_50180: Predicted homogentisate dioxygenase, GloA family |
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Predicted homogentisate dioxygenase, GloA family |
| hmgC |
Gene: Avin_50190: Fumarylacetoacetase (EC 3.7.1.2) |
Gene: PA2008: Fumarylacetoacetase (EC 3.7.1.2) |
Gene: PSEEN4611: Fumarylacetoacetase (EC 3.7.1.2) |
Gene: PFL_0968: Fumarylacetoacetase (EC 3.7.1.2) |
Gene: Pmen_1698: Fumarylacetoacetase (EC 3.7.1.2) |
Gene: PP4620: Fumarylacetoacetase (EC 3.7.1.2) |
Gene: PST_0871: Fumarylacetoacetase (EC 3.7.1.2) |
Gene: PSPTO3550: Fumarylacetoacetase (EC 3.7.1.2) |
Fumarylacetoacetase (EC 3.7.1.2) |
| hmgB |
Gene: Avin_50200: Maleylacetoacetate isomerase (EC 5.2.1.2) |
Gene: PA2007: Maleylacetoacetate isomerase (EC 5.2.1.2) |
Gene: PSEEN4610: Maleylacetoacetate isomerase (EC 5.2.1.2) |
Gene: PFL_0969: Maleylacetoacetate isomerase (EC 5.2.1.2) |
Gene: Pmen_1699: Maleylacetoacetate isomerase (EC 5.2.1.2) |
Gene: PP4619: Maleylacetoacetate isomerase (EC 5.2.1.2) |
Gene: PST_0872: Maleylacetoacetate isomerase (EC 5.2.1.2) |
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Maleylacetoacetate isomerase (EC 5.2.1.2) |
| CRON 2. | |||||||||
| hmgQ |
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Azotobacter vinelandii AvOP Site: position = -38 score = 5.29688 sequence = ATCTAAAAAATAGAT Gene: Avin_50160: Tyrosine degradation transcriptional regulator, LysR family |
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Tyrosine degradation transcriptional regulator, LysR family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |