Regulog Bamb_3558 - Burkholderia

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum:	Proteobacteria/Beta
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 4 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Burkholderia cepacia AMMD	1	1
Burkholderia glumae BGR1
Burkholderia mallei ATCC 23344
Burkholderia phymatum STM815	1	1
Burkholderia pseudomallei K96243
Burkholderia sp. 383	1	1
Burkholderia vietnamiensis G4	1	1
Burkholderia xenovorans LB400

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes									Function

CRON 1.
bglu_1g21320	Burkholderia cepacia AMMD	Burkholderia glumae BGR1 Gene: bglu_1g21320: hypothetical protein	Burkholderia mallei ATCC 23344	* Burkholderia phymatum STM815 Site: position = -171 score = 18.9721 sequence = CCAGATACAGCCGA-(11)-AGCGGAACAGAGCA-(17)-AGCGGTGCAGATTC-(9)-GAGTCTGTTGTGTT Gene: Bphy_3122: hypothetical protein	Burkholderia pseudomallei K96243	Burkholderia sp. 383	Burkholderia vietnamiensis G4	Burkholderia xenovorans LB400	hypothetical protein

CRON 2.
Bamb_3557	* Burkholderia cepacia AMMD Site: position = -170 score = 23.2154 sequence = CCAGATACAGATTC-(11)-ACCGATACAGCAGG-(17)-ACCGCAACAGATTC-(9)-GAATCTGTCCGGCC Gene: Bamb_3557: hypothetical protein	Burkholderia glumae BGR1	Burkholderia mallei ATCC 23344	Burkholderia phymatum STM815	Burkholderia pseudomallei K96243	* Burkholderia sp. 383 Site: position = -170 score = 22.9219 sequence = CCAGATACAGATTC-(11)-ACCGATACAGCGAT-(17)-ACCGCAACAGATTC-(9)-GAATCTGTCGTGCC Gene: Bcep18194_B1881: hypothetical protein	* Burkholderia vietnamiensis G4 Site: position = -170 score = 22.8869 sequence = CCAGATACAGATGT-(11)-ACCGATACAGCGCG-(17)-ACCGCAACAGATCG-(9)-GAATCTGTCCCGCT Gene: Bcep1808_4709: hypothetical protein	Burkholderia xenovorans LB400	hypothetical protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --