Regulog SACE_6928 - Frankineae/Propionibacterineae/Pseudonocardiaceae

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Metabolite transport
Effector:
Phylum:	Actinobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 3 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Actinosynnema mirum DSM 43827
Saccharomonospora viridis DSM 43017
Saccharopolyspora erythraea NRRL 2338	2	2
Nakamurella multipartita DSM 44233	1	1
Frankia sp. EAN1pec
Frankia sp. CcI3
Acidothermus cellulolyticus 11B
Nocardioides sp. JS614
Propionibacterium acnes KPA171202

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes										Function

CRON 1.
PF00892	Actinosynnema mirum DSM 43827	Saccharomonospora viridis DSM 43017	* Saccharopolyspora erythraea NRRL 2338 Site: position = -61 score = 8.03026 sequence = GAAGTGGACCAA-(12)-AAAGTGGCGCTT Gene: SACE_6927: Permease of the drug/metabolite transporter (DMT) superfamily	* Nakamurella multipartita DSM 44233 Site: position = -84 score = 6.16947 sequence = CCTTTGGACCTG-(12)-GGAATGGACTCC Gene: Namu_4808: Permease of the drug/metabolite transporter (DMT) superfamily	Frankia sp. EAN1pec	Frankia sp. CcI3	Acidothermus cellulolyticus 11B	Nocardioides sp. JS614	Propionibacterium acnes KPA171202	Permease of the drug/metabolite transporter (DMT) superfamily

CRON 2.
PF00701	Actinosynnema mirum DSM 43827	Saccharomonospora viridis DSM 43017	* Saccharopolyspora erythraea NRRL 2338 Site: position = -109 score = 8.37874 sequence = GGAGTGGCCCTT-(12)-GGATTGGCCCTT Gene: SACE_1253: Dihydrodipicolinate synthase (EC 4.2.1.52)	Nakamurella multipartita DSM 44233	Frankia sp. EAN1pec	Frankia sp. CcI3	Acidothermus cellulolyticus 11B	Nocardioides sp. JS614	Propionibacterium acnes KPA171202	Dihydrodipicolinate synthase (EC 4.2.1.52)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --