Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog SACE_6928 - Frankineae/Propionibacterineae/Pseudonocardiaceae

Properties
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process: Metabolite transport
Effector:
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 3 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Actinosynnema mirum DSM 43827
Saccharomonospora viridis DSM 43017
Saccharopolyspora erythraea NRRL 2338 2 2
Nakamurella multipartita DSM 44233 1 1
Frankia sp. EAN1pec
Frankia sp. CcI3
Acidothermus cellulolyticus 11B
Nocardioides sp. JS614
Propionibacterium acnes KPA171202
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
PF00892
 
Actinosynnema mirum DSM 43827
 
Saccharomonospora viridis DSM 43017
*
Saccharopolyspora erythraea NRRL 2338

Site:
position = -61
score = 8.03026
sequence = GAAGTGGACCAA-(12)-AAAGTGGCGCTT

Gene: SACE_6927: Permease of the drug/metabolite transporter (DMT) superfamily
*
Nakamurella multipartita DSM 44233

Site:
position = -84
score = 6.16947
sequence = CCTTTGGACCTG-(12)-GGAATGGACTCC

Gene: Namu_4808: Permease of the drug/metabolite transporter (DMT) superfamily
 
Frankia sp. EAN1pec
 
Frankia sp. CcI3
 
Acidothermus cellulolyticus 11B
 
Nocardioides sp. JS614
 
Propionibacterium acnes KPA171202
Permease of the drug/metabolite transporter (DMT) superfamily
 
CRON 2.
PF00701
 
Actinosynnema mirum DSM 43827
 
Saccharomonospora viridis DSM 43017
*
Saccharopolyspora erythraea NRRL 2338

Site:
position = -109
score = 8.37874
sequence = GGAGTGGCCCTT-(12)-GGATTGGCCCTT

Gene: SACE_1253: Dihydrodipicolinate synthase (EC 4.2.1.52)
 
Nakamurella multipartita DSM 44233
 
Frankia sp. EAN1pec
 
Frankia sp. CcI3
 
Acidothermus cellulolyticus 11B
 
Nocardioides sp. JS614
 
Propionibacterium acnes KPA171202
Dihydrodipicolinate synthase (EC 4.2.1.52)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD