Regulog YdfD/YisV - Clostridia-1
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | repressor (activator) |
| Biological process: | Metabolite transport |
| Effector: | |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Clostridia-1
- By TF family - GntR/MocR
- By pathway - Metabolite transport
| Genome | Genes | Operons |
|---|---|---|
| Clostridium acetobutylicum ATCC 824 | ||
| Clostridium beijerincki NCIMB 8052 | 1 | 1 |
| Clostridium botulinum A str. ATCC 3502 | ||
| Clostridium butyricum 5521 | ||
| Clostridium kluyveri DSM 555 | 1 | 1 |
| Clostridium novyi NT | ||
| Clostridium perfringens ATCC 13124 | ||
| Clostridium tetani E88 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| yisU |
Gene: CAC2593: Hypothetical efflux transporter, LysE family |
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Clostridium beijerincki NCIMB 8052 Site: position = -88 score = 8.61748 sequence = TGGTTGG-(17)-TGGTTGG Gene: Cbei_2084: Hypothetical efflux transporter, LysE family |
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Clostridium kluyveri DSM 555 Site: position = -116 score = 8.13894 sequence = TGGTTGG-(17)-TGGATGG Gene: CKL_2223: Hypothetical efflux transporter, LysE family |
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Hypothetical efflux transporter, LysE family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |