Regulog YdfD/YisV - Clostridia-1

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:	repressor (activator)
Biological process:	Metabolite transport
Effector:
Phylum:	Firmicutes
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 2 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Clostridium acetobutylicum ATCC 824
Clostridium beijerincki NCIMB 8052	1	1
Clostridium botulinum A str. ATCC 3502
Clostridium butyricum 5521
Clostridium kluyveri DSM 555	1	1
Clostridium novyi NT
Clostridium perfringens ATCC 13124
Clostridium tetani E88

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes									Function

CRON 1.
yisU	Clostridium acetobutylicum ATCC 824 Gene: CAC2593: Hypothetical efflux transporter, LysE family	* Clostridium beijerincki NCIMB 8052 Site: position = -88 score = 8.61748 sequence = TGGTTGG-(17)-TGGTTGG Gene: Cbei_2084: Hypothetical efflux transporter, LysE family	Clostridium botulinum A str. ATCC 3502	Clostridium butyricum 5521	* Clostridium kluyveri DSM 555 Site: position = -116 score = 8.13894 sequence = TGGTTGG-(17)-TGGATGG Gene: CKL_2223: Hypothetical efflux transporter, LysE family	Clostridium novyi NT	Clostridium perfringens ATCC 13124	Clostridium tetani E88	Hypothetical efflux transporter, LysE family

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --