Regulog YdfD/YisV - Staphylococcaceae
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | repressor (activator) |
| Biological process: | Metabolite transport |
| Effector: | |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Staphylococcaceae
- By TF family - GntR/MocR
- By pathway - Metabolite transport
| Genome | Genes | Operons |
|---|---|---|
| Macrococcus caseolyticus JCSC5402 | ||
| Staphylococcus aureus subsp. aureus N315 | 1 | 1 |
| Staphylococcus capitis SK14 | 2 | 1 |
| Staphylococcus carnosus subsp. carnosus TM300 | 1 | 1 |
| Staphylococcus epidermidis ATCC 12228 | ||
| Staphylococcus haemolyticus JCSC1435 | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | 1 | 1 |
| Genes | Function | |||||||
|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||
| ydfC |
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Staphylococcus aureus subsp. aureus N315 Site: position = -91 score = 6.7502 sequence = TGGATAG-(17)-TGGTTGT Gene: SA0103: Permease of the drug/metabolite transporter (DMT) superfamily |
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Permease of the drug/metabolite transporter (DMT) superfamily |
| CRON 2. | ||||||||
| desA |
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Staphylococcus capitis SK14 Site: position = -78 score = 7.69569 sequence = TGGTTGG-(16)-TGGTAGT Gene: STACA0001_1859: putative fatty acid desaturase |
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putative fatty acid desaturase |
| yisU |
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Gene: STACA0001_1860: Hypothetical efflux transporter, LysE family |
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Staphylococcus carnosus subsp. carnosus TM300 Site: position = -731 score = 8.17505 sequence = TGGTTGG-(16)-TGGTAGG Gene: Sca_0253: Hypothetical efflux transporter, LysE family |
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Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 Site: position = -98 score = 7.96345 sequence = TGGTTGG-(16)-TGGTGGG Gene: SSP2040: Hypothetical efflux transporter, LysE family |
Hypothetical efflux transporter, LysE family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |