Regulog GabR2 - Pseudomonadaceae

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Gamma-aminobutyrate utilization
Effector:	Gamma-aminobutyric acid
Phylum:	Proteobacteria/Gamma
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 2 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Azotobacter vinelandii AvOP
Pseudomonas aeruginosa PAO1
Pseudomonas entomophila L48	1	1
Pseudomonas fluorescens Pf-5
Pseudomonas mendocina ymp
Pseudomonas putida KT2440	1	1
Pseudomonas stutzeri A1501
Pseudomonas syringae pv. tomato str. DC3000

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes									Function

CRON 1.
gabP	Azotobacter vinelandii AvOP	Pseudomonas aeruginosa PAO1	* Pseudomonas entomophila L48 Site: position = -217 score = 6.0 sequence = TGATGTACAGGT Gene: PSEEN2395: Gamma-aminobutyrate permease	Pseudomonas fluorescens Pf-5	Pseudomonas mendocina ymp	* Pseudomonas putida KT2440 Site: position = -78 score = 6.0 sequence = TGATGTACAGGT Gene: PP2543: Gamma-aminobutyrate permease	Pseudomonas stutzeri A1501	Pseudomonas syringae pv. tomato str. DC3000	Gamma-aminobutyrate permease

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --