Regulog Bll4368 - Rhizobiales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Glycolate utilization; Lactate utilization |
| Effector: | |
| Phylum: | Proteobacteria/Alpha |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhizobiales
- By TF family - GntR/Others
- By pathway - Glycolate utilization
- By pathway - Lactate utilization
| Genome | Genes | Operons |
|---|---|---|
| Agrobacterium tumefaciens str. C58 (Cereon) | ||
| Azorhizobium caulinodans ORS 571 | ||
| Bartonella quintana str. Toulouse | ||
| Bradyrhizobium japonicum USDA 110 | 14 | 5 |
| Bradyrhizobium sp. BTAi1 | 4 | 3 |
| Brucella melitensis 16M | ||
| Mesorhizobium loti MAFF303099 | ||
| Mesorhizobium sp. BNC1 | ||
| Nitrobacter winogradskyi Nb-255 | ||
| Rhizobium etli CFN 42 | ||
| Rhizobium leguminosarum bv. viciae 3841 | ||
| Rhizobium sp. NGR234 | ||
| Rhodopseudomonas palustris CGA009 | ||
| Sinorhizobium meliloti 1021 | ||
| Xanthobacter autotrophicus Py2 |
| Genes | Function | |||||||||||||||
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| CRON 1. | ||||||||||||||||
| bll6037 |
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*2
Bradyrhizobium japonicum USDA 110 Site: position = -7 score = 5.01526 sequence = AAAATGAATGCAAAAT Gene: bll6039: Serine--glyoxylate aminotransferase (EC 2.6.1.45) Gene: bll6037: Serine--glyoxylate aminotransferase (EC 2.6.1.45) |
*2
Bradyrhizobium sp. BTAi1 Site: position = -86 score = 4.29964 sequence = TATATGAATTCGTTAT Site: position = -53 score = 4.70294 sequence = AAATTGCATGCAATCA Gene: BBta_5729: Serine--glyoxylate aminotransferase (EC 2.6.1.45) Gene: BBta_5728: Serine--glyoxylate aminotransferase (EC 2.6.1.45) |
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Gene: Nwi_2413: Serine--glyoxylate aminotransferase (EC 2.6.1.45) |
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Serine--glyoxylate aminotransferase (EC 2.6.1.45) |
| bll6038 |
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Gene: bll6038: major facilitator superfamily transport protein |
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major facilitator superfamily transport protein |
| bll6036 |
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Gene: bll6036: Enoyl-CoA hydratase (EC 4.2.1.17) |
Gene: BBta_5727: Enoyl-CoA hydratase (EC 4.2.1.17) |
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Enoyl-CoA hydratase (EC 4.2.1.17) |
| CRON 2. | ||||||||||||||||
| dld2 |
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Bradyrhizobium japonicum USDA 110 Site: position = -86 score = 5.24812 sequence = ATTTTGAATTCATAAT Gene: blr6041: D-lactate dehydrogenase, alternative |
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Bradyrhizobium sp. BTAi1 Site: position = -98 score = 4.82138 sequence = AAATTGCATGCAATCT Gene: BBta_5731: D-lactate dehydrogenase, alternative |
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Gene: Xaut_2720: D-lactate dehydrogenase, alternative |
D-lactate dehydrogenase, alternative |
| AZC_4683 |
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Gene: AZC_4683: Uncharacterized protein, possibly involved in utilization of glycolate and propanediol |
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Gene: blr6042: Uncharacterized protein, possibly involved in utilization of glycolate and propanediol |
Gene: BBta_5732: Uncharacterized protein, possibly involved in utilization of glycolate and propanediol |
Gene: BMEI0273: Uncharacterized protein, possibly involved in utilization of glycolate and propanediol |
2
Mesorhizobium loti MAFF303099 Gene: msr9402: Uncharacterized protein, possibly involved in utilization of glycolate and propanediol Gene: mlr3780: Uncharacterized protein, possibly involved in utilization of glycolate and propanediol |
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Gene: Xaut_0298: Uncharacterized protein, possibly involved in utilization of glycolate and propanediol |
Uncharacterized protein, possibly involved in utilization of glycolate and propanediol |
| CRON 3. | ||||||||||||||||
| blr4369 |
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Bradyrhizobium japonicum USDA 110 Site: position = -104 score = 5.13436 sequence = AATTTGAATGCAAAAA Site: position = -42 score = 4.76092 sequence = ATTCTGCATTCAAAAA Gene: blr4369: Enoyl-CoA hydratase (EC 4.2.1.17) |
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Enoyl-CoA hydratase (EC 4.2.1.17) |
| blr4370 |
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Gene: blr4370: L-carnitine dehydratase/bile acid-inducible protein F |
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L-carnitine dehydratase/bile acid-inducible protein F |
| tctC |
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Gene: blr4371: Tricarboxylate transport protein TctC, periplasmic binding subunit |
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Gene: NGR_b21120: Tricarboxylate transport protein TctC, periplasmic binding subunit |
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Gene: SMb20771: Tricarboxylate transport protein TctC, periplasmic binding subunit |
Gene: Xaut_0482: Tricarboxylate transport protein TctC, periplasmic binding subunit |
Tricarboxylate transport protein TctC, periplasmic binding subunit |
| tctB |
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Gene: blr4372: Tricarboxylate transport protein TctB, small permease component |
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Gene: NGR_b21110: Tricarboxylate transport protein TctB, small permease component |
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Gene: SMb20770: Tricarboxylate transport protein TctB, small permease component |
Gene: Xaut_0483: Tricarboxylate transport protein TctB, small permease component |
Tricarboxylate transport protein TctB, small permease component |
| tctA |
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Gene: blr4373: Tricarboxylate transport membrane protein TctA, large permease component |
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Gene: NGR_b21100: Tricarboxylate transport membrane protein TctA, large permease component |
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Gene: SMb20769: Tricarboxylate transport membrane protein TctA, large permease component |
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Tricarboxylate transport membrane protein TctA, large permease component |
| blr4374 |
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Gene: blr4374: 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) |
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Gene: NGR_b21130: 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) |
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Gene: SMb20772: 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) |
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4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) |
| CRON 4. | ||||||||||||||||
| Bll4368 |
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*2
Bradyrhizobium japonicum USDA 110 Site: position = -7 score = 4.76092 sequence = TTTTTGAATGCAGAAT Site: position = 55 score = 5.13436 sequence = TTTTTGCATTCAAATT Gene: bll4368: Transcriptional regulator associated with tricarboxylic transport, GntR family Site: position = -82 score = 5.01526 sequence = ATTTTGCATTCATTTT Gene: blr6040: Transcriptional regulator associated with tricarboxylic transport, GntR family |
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Bradyrhizobium sp. BTAi1 Site: position = -100 score = 4.70294 sequence = TGATTGCATGCAATTT Site: position = -67 score = 4.29964 sequence = ATAACGAATTCATATA Gene: BBta_5730: Transcriptional regulator associated with tricarboxylic transport, GntR family |
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Transcriptional regulator associated with tricarboxylic transport, GntR family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |