Regulog YdcR - Psychromonadaceae/Aeromonadales

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum:	Proteobacteria/Gamma
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 2 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Aeromonas hydrophila subsp. hydrophila ATCC 7966	2	1
Aeromonas salmonicida subsp. salmonicida A449	2	1
Tolumonas auensis DSM 9187
Moritella sp. PE36
Psychromonas ingrahamii 37
Psychromonas sp. CNPT3

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes							Function

CRON 1.
PF01654	* Aeromonas hydrophila subsp. hydrophila ATCC 7966 Site: position = -110 score = 9.12549 sequence = AACTGTTATAGGTGT-(10)-AACTGCATCTGTTAT Gene: AHA_1640: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	* Aeromonas salmonicida subsp. salmonicida A449 Site: position = -110 score = 9.12549 sequence = AACTGTTATAGGTGT-(10)-AACTGCATCTGTTAT Gene: ASA_2721: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	Tolumonas auensis DSM 9187	Moritella sp. PE36	Psychromonas ingrahamii 37	Psychromonas sp. CNPT3	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
PF02322	Aeromonas hydrophila subsp. hydrophila ATCC 7966 Gene: AHA_1641: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	Aeromonas salmonicida subsp. salmonicida A449 Gene: ASA_2720: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	Tolumonas auensis DSM 9187	Moritella sp. PE36	Psychromonas ingrahamii 37	Psychromonas sp. CNPT3	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --