Regulog YdcR - Psychromonadaceae/Aeromonadales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | |
| Effector: | |
| Phylum: | Proteobacteria/Gamma |
| Visualization: | |
|
Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Psychromonadaceae/Aeromonadales
- By TF family - GntR/MocR
| Genome | Genes | Operons |
|---|---|---|
| Aeromonas hydrophila subsp. hydrophila ATCC 7966 | 2 | 1 |
| Aeromonas salmonicida subsp. salmonicida A449 | 2 | 1 |
| Tolumonas auensis DSM 9187 | ||
| Moritella sp. PE36 | ||
| Psychromonas ingrahamii 37 | ||
| Psychromonas sp. CNPT3 |
| Genes | Function | ||||||
|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||
| PF01654 |
*
Aeromonas hydrophila subsp. hydrophila ATCC 7966 Site: position = -110 score = 9.12549 sequence = AACTGTTATAGGTGT-(10)-AACTGCATCTGTTAT Gene: AHA_1640: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) |
*
Aeromonas salmonicida subsp. salmonicida A449 Site: position = -110 score = 9.12549 sequence = AACTGTTATAGGTGT-(10)-AACTGCATCTGTTAT Gene: ASA_2721: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) |
|
|
|
|
Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) |
| PF02322 |
Gene: AHA_1641: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) |
Gene: ASA_2720: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) |
|
|
|
|
Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |