Regulog Sbal_1936 - Shewanellaceae

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Metabolite transport
Effector:
Phylum:	Proteobacteria/Gamma
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 1 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Shewanella amazonensis SB2B
Shewanella baltica OS155	2	1
Shewanella denitrificans OS217
Shewanella frigidimarina NCIMB 400
Shewanella halifaxensis HAW-EB4
Shewanella loihica PV-4
Shewanella oneidensis MR-1
Shewanella pealeana ATCC 700345
Shewanella piezotolerans WP3
Shewanella putrefaciens CN-32
Shewanella sediminis HAW-EB3
Shewanella sp ANA-3
Shewanella sp MR-4
Shewanella sp MR-7
Shewanella sp W3-18-1
Shewanella woodyi ATCC 51908

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes																	Function

CRON 1.
phzF	Shewanella amazonensis SB2B	* Shewanella baltica OS155 Site: position = -98 score = 8.88194 sequence = AATTGTGTCCATAA-(17)-GTCTGTTACCATTG Gene: Sbal_1937: Phenazine biosynthesis protein PhzF	Shewanella denitrificans OS217	Shewanella frigidimarina NCIMB 400	Shewanella halifaxensis HAW-EB4	Shewanella loihica PV-4	Shewanella oneidensis MR-1	Shewanella pealeana ATCC 700345	Shewanella piezotolerans WP3	Shewanella putrefaciens CN-32	Shewanella sediminis HAW-EB3	Shewanella sp ANA-3	Shewanella sp MR-4	Shewanella sp MR-7	Shewanella sp W3-18-1	Shewanella woodyi ATCC 51908	Phenazine biosynthesis protein PhzF
ydfC	Shewanella amazonensis SB2B	Shewanella baltica OS155 Gene: Sbal_1938: Permeases of the drug/metabolite transporter (DMT) superfamily	Shewanella denitrificans OS217	Shewanella frigidimarina NCIMB 400	Shewanella halifaxensis HAW-EB4	Shewanella loihica PV-4	Shewanella oneidensis MR-1	Shewanella pealeana ATCC 700345	Shewanella piezotolerans WP3	Shewanella putrefaciens CN-32	Shewanella sediminis HAW-EB3	Shewanella sp ANA-3	Shewanella sp MR-4	Shewanella sp MR-7	Shewanella sp W3-18-1	Shewanella woodyi ATCC 51908	Permeases of the drug/metabolite transporter (DMT) superfamily

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --