Regulog BAV2922 - Alcaligenaceae

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Metabolite transport
Effector:
Phylum:	Proteobacteria/Beta
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 3 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Bordetella avium 197N	2	1
Bordetella bronchiseptica RB50	2	1
Bordetella petrii DSM 12804	1	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes				Function

CRON 1.
PF00892	* Bordetella avium 197N Site: position = -95 score = 18.5413 sequence = TAACTGTCATG-(10)-CAGGCCAGTGA-(15)-CAAGTGTATCG-(0)-GTACTGTATCG Gene: BAV2923: Permease of the drug/metabolite transporter (DMT) superfamily	2 Bordetella bronchiseptica RB50* Gene: BB1066: Permease of the drug/metabolite transporter (DMT) superfamily Site: position = -153 score = 19.03 sequence = CAACTGTCATG-(10)-CAGGCCAGTGA-(15)-AAAGTGTACCG-(0)-GTACTGTACCG Gene: BB4263: Permease of the drug/metabolite transporter (DMT) superfamily	* Bordetella petrii DSM 12804 Site: position = -131 score = 18.7915 sequence = TAACTGTCATG-(10)-CAGGCCAGTAA-(15)-AAAGTGTACCG-(0)-GTACTGTACTG Gene: Bpet0646: Permease of the drug/metabolite transporter (DMT) superfamily	Permease of the drug/metabolite transporter (DMT) superfamily
PF01810	Bordetella avium 197N Gene: BAV2924: Transporter, LysE family	Bordetella bronchiseptica RB50 Gene: BB4264: Transporter, LysE family	Bordetella petrii DSM 12804 Gene: Bpet0645: Transporter, LysE family	Transporter, LysE family

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --