Regulog BAV2922 - Alcaligenaceae
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Metabolite transport |
| Effector: | |
| Phylum: | Proteobacteria/Beta |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Alcaligenaceae
- By TF family - GntR/MocR
- By pathway - Metabolite transport
| Genome | Genes | Operons |
|---|---|---|
| Bordetella avium 197N | 2 | 1 |
| Bordetella bronchiseptica RB50 | 2 | 1 |
| Bordetella petrii DSM 12804 | 1 | 1 |
| Genes | Function | |||
|---|---|---|---|---|
| CRON 1. | ||||
| PF00892 |
*
Bordetella avium 197N Site: position = -95 score = 18.5413 sequence = TAACTGTCATG-(10)-CAGGCCAGTGA-(15)-CAAGTGTATCG-(0)-GTACTGTATCG Gene: BAV2923: Permease of the drug/metabolite transporter (DMT) superfamily |
*2
Bordetella bronchiseptica RB50 Gene: BB1066: Permease of the drug/metabolite transporter (DMT) superfamily Site: position = -153 score = 19.03 sequence = CAACTGTCATG-(10)-CAGGCCAGTGA-(15)-AAAGTGTACCG-(0)-GTACTGTACCG Gene: BB4263: Permease of the drug/metabolite transporter (DMT) superfamily |
*
Bordetella petrii DSM 12804 Site: position = -131 score = 18.7915 sequence = TAACTGTCATG-(10)-CAGGCCAGTAA-(15)-AAAGTGTACCG-(0)-GTACTGTACTG Gene: Bpet0646: Permease of the drug/metabolite transporter (DMT) superfamily |
Permease of the drug/metabolite transporter (DMT) superfamily |
| PF01810 |
Gene: BAV2924: Transporter, LysE family |
Gene: BB4264: Transporter, LysE family |
Gene: Bpet0645: Transporter, LysE family |
Transporter, LysE family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |