Regulog Mll0059 - Rhizobiales

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum:	Proteobacteria/Alpha
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 16 sites [see more]

Member of regulog collections

By taxonomy - Rhizobiales
By TF family - GntR/MocR

Statistics of regulated genes
Genome	Genes	Operons
Agrobacterium tumefaciens str. C58 (Cereon)	2	2
Azorhizobium caulinodans ORS 571
Bartonella quintana str. Toulouse
Bradyrhizobium japonicum USDA 110
Bradyrhizobium sp. BTAi1
Brucella melitensis 16M
Mesorhizobium loti MAFF303099	2	2
Mesorhizobium sp. BNC1
Nitrobacter winogradskyi Nb-255
Rhizobium etli CFN 42	3	3
Rhizobium leguminosarum bv. viciae 3841	2	2
Rhizobium sp. NGR234	2	2
Rhodopseudomonas palustris CGA009
Sinorhizobium meliloti 1021	3	3
Xanthobacter autotrophicus Py2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes																Function

CRON 1.
Mll0059	* Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -10 score = 9.18016 sequence = AATTGTCA-(3)-TGACAAAT Gene: Atu1848: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	* Mesorhizobium loti MAFF303099 Site: position = -10 score = 9.18016 sequence = AATTGTCA-(3)-TGACAAAT Gene: mll0059: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	* Rhizobium etli CFN 42 Site: position = -34 score = 6.01859 sequence = CAGAGTCA-(3)-TGACAATA Site: position = -10 score = 9.18016 sequence = AATTGTCA-(3)-TGACAAAT Gene: RHE_CH02284: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)	* Rhizobium leguminosarum bv. viciae 3841 Site: position = -10 score = 9.18016 sequence = AATTGTCA-(3)-TGACAAAT Gene: RL2610: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)	* Rhizobium sp. NGR234 Site: position = -10 score = 9.00457 sequence = AATTGTCA-(3)-TGACAACT Gene: NGR_c16240: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)	Rhodopseudomonas palustris CGA009	* Sinorhizobium meliloti 1021 Site: position = -10 score = 9.00457 sequence = AATTGTCA-(3)-TGACAACT Gene: SMc00490: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)	Xanthobacter autotrophicus Py2	Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)

CRON 2.
PF06568	* Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -102 score = 9.18016 sequence = ATTTGTCA-(3)-TGACAATT Gene: Atu1847: Domain of unknown function (DUF1127)	Azorhizobium caulinodans ORS 571 Gene: AZC_4466: Domain of unknown function (DUF1127)	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	2 Mesorhizobium loti MAFF303099* Gene: msr3036: Domain of unknown function (DUF1127) Site: position = -102 score = 9.18016 sequence = ATTTGTCA-(3)-TGACAATT Gene: msr0060: Domain of unknown function (DUF1127)	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	* Rhizobium etli CFN 42 Site: position = -90 score = 9.18016 sequence = ATTTGTCA-(3)-TGACAATT Site: position = -66 score = 6.01859 sequence = TATTGTCA-(3)-TGACTCTG Gene: RHE_CH02283: Domain of unknown function (DUF1127)	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009	* Sinorhizobium meliloti 1021 Site: position = -181 score = 9.00457 sequence = AGTTGTCA-(3)-TGACAATT Gene: SMc00491: Domain of unknown function (DUF1127)	Xanthobacter autotrophicus Py2	Domain of unknown function (DUF1127)

CRON 3.
phzF	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110 Gene: bll5643: Phenazine biosynthesis protein PhzF like	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	* Rhizobium etli CFN 42 Site: position = -80 score = 5.98092 sequence = CATTGTCA-(3)-CGACAAGA Gene: RHE_CH03501: Phenazine biosynthesis protein PhzF like	* Rhizobium leguminosarum bv. viciae 3841 Site: position = -81 score = 5.98092 sequence = CATTGTCA-(3)-CGACAAGA Gene: RL4013: Phenazine biosynthesis protein PhzF like	* Rhizobium sp. NGR234 Site: position = -84 score = 7.69412 sequence = AATTGTCA-(3)-AGACAAGT Gene: NGR_c28110: Phenazine biosynthesis protein PhzF like	Rhodopseudomonas palustris CGA009 Gene: RPA3182: Phenazine biosynthesis protein PhzF like	* Sinorhizobium meliloti 1021 Site: position = -85 score = 7.69412 sequence = AATTGTCA-(3)-AGACAAGT Gene: SMc03984: Phenazine biosynthesis protein PhzF like	Xanthobacter autotrophicus Py2	Phenazine biosynthesis protein PhzF like

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog Mll0059 - Rhizobiales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --