Regulog CD2285 - Clostridia-2

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum:	Firmicutes
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 3 sites [see more]

Member of regulog collections

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes				Function

CRON 1.
azlC	Clostridium bartlettii DSM 16795	* Clostridium difficile 630 Site: position = -280 score = 8.04209 sequence = TAATTGTAT-(3)-ACACAATAT Gene: CD2286: Branched-chain amino acid transport protein azlC	Clostridium hiranonis DSM 13275 Gene: CLOHIR_00850: Branched-chain amino acid transport protein azlC	Branched-chain amino acid transport protein azlC
CD2287	Clostridium bartlettii DSM 16795	Clostridium difficile 630 Gene: CD2287: Integral membrane protein	Clostridium hiranonis DSM 13275 Gene: CLOHIR_00849: Integral membrane protein	Integral membrane protein

CRON 2.
CD2285	Clostridium bartlettii DSM 16795	2 Clostridium difficile 630* Gene: CD2285: Transcriptional regulator, GntR family Site: position = -41 score = 8.74681 sequence = AAATTGTAT-(3)-GTACAATTA Gene: CD2253: Transcriptional regulator, GntR family	Clostridium hiranonis DSM 13275	Transcriptional regulator, GntR family

CRON 3.
racX	Clostridium bartlettii DSM 16795	* Clostridium difficile 630 Site: position = -108 score = 8.74681 sequence = TAATTGTAC-(3)-ATACAATTT Gene: CD2254: Uncharacterized protein YgeA of aspartate/glutamate/hydantoin racemase family	Clostridium hiranonis DSM 13275	Uncharacterized protein YgeA of aspartate/glutamate/hydantoin racemase family

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --