Regulog PdxQ2 - Comamonadaceae
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Metabolite transport; Pyridoxine/pyridoxal homeostasis |
| Effector: | |
| Phylum: | Proteobacteria/Beta |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Comamonadaceae
- By TF family - GntR/MocR
- By pathway - Metabolite transport
- By pathway - Pyridoxine/pyridoxal homeostasis
| Genome | Genes | Operons |
|---|---|---|
| Acidovorax avenae subsp. citrulli AAC00-1 | ||
| Acidovorax sp. JS42 | ||
| Comamonas testosteroni KF-1 | ||
| Delftia acidovorans SPH-1 | 3 | 2 |
| Leptothrix cholodnii SP-6 | ||
| Methylibium petroleiphilum PM1 | ||
| Polaromonas naphthalenivorans CJ2 | ||
| Polaromonas sp. JS666 | ||
| Rhodoferax ferrireducens DSM 15236 | ||
| Variovorax paradoxus S110 | ||
| Verminephrobacter eiseniae EF01-2 |
| Genes | Function | |||||||||||
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| CRON 1. | ||||||||||||
| COG0346 |
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Delftia acidovorans SPH-1 Site: position = -51 score = 8.5378 sequence = ATGAGTGTGCC-(0)-GTGACACTATT Gene: Daci_5877: Lactoylglutathione lyase and related lyases |
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Lactoylglutathione lyase and related lyases |
| phzF |
Gene: Aave_4439: Phenazine biosynthesis protein PhzF |
Gene: Ajs_3846: Phenazine biosynthesis protein PhzF |
Gene: CtesDRAFT_4334: Phenazine biosynthesis protein PhzF |
2
Delftia acidovorans SPH-1 Gene: Daci_5876: Phenazine biosynthesis protein PhzF Gene: Daci_0592: Phenazine biosynthesis protein PhzF |
Gene: Lcho_3538: Phenazine biosynthesis protein PhzF |
Gene: Mpe_A0187: Phenazine biosynthesis protein PhzF |
Gene: Pnap_0400: Phenazine biosynthesis protein PhzF |
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Gene: Rfer_3731: Phenazine biosynthesis protein PhzF |
Gene: Vapar_0741: Phenazine biosynthesis protein PhzF |
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Phenazine biosynthesis protein PhzF |
| CRON 2. | ||||||||||||
| pdxQ2 |
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Delftia acidovorans SPH-1 Site: position = -40 score = 8.5378 sequence = AATAGTGTCAC-(0)-GGCACACTCAT Gene: Daci_5878: Transcriptional regulator, GntR/MocR family |
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Transcriptional regulator, GntR/MocR family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |