Regulog PTD2_03046 - Alteromonadales

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Metabolite transport
Effector:
Phylum:	Proteobacteria/Gamma
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 3 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Idiomarina baltica OS145
Idiomarina loihiensis L2TR
Pseudoalteromonas atlantica T6c
Pseudoalteromonas haloplanktis TAC125
Pseudoalteromonas tunicata D2	2	2
Alteromonas macleodii 'Deep ecotype'
Alteromonadales bacterium TW-7
Glaciecola sp. HTCC2999
Colwellia psychrerythraea 34H

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes										Function

CRON 1.
PF01810	Idiomarina baltica OS145	Idiomarina loihiensis L2TR	Pseudoalteromonas atlantica T6c	Pseudoalteromonas haloplanktis TAC125	* Pseudoalteromonas tunicata D2 Site: position = -26 score = 8.23786 sequence = AATTGTATG-(0)-CGTACAATT Site: position = -111 score = 7.96834 sequence = AATTGTCAT-(1)-AGTACAATA Gene: PTD2_03041: Transporter, LysE family	Alteromonas macleodii 'Deep ecotype'	Alteromonadales bacterium TW-7	Glaciecola sp. HTCC2999	Colwellia psychrerythraea 34H	Transporter, LysE family

CRON 2.
PTD2_03046	Idiomarina baltica OS145	Idiomarina loihiensis L2TR	Pseudoalteromonas atlantica T6c	Pseudoalteromonas haloplanktis TAC125	* Pseudoalteromonas tunicata D2 Site: position = -49 score = 8.23786 sequence = AATTGTACG-(0)-CATACAATT Gene: PTD2_03046: Transcriptional regulator, GntR family	Alteromonas macleodii 'Deep ecotype'	Alteromonadales bacterium TW-7	Glaciecola sp. HTCC2999	Colwellia psychrerythraea 34H	Transcriptional regulator, GntR family

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --