Regulog PdxQ - Mycobacteriaceae

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Pyridoxine/pyridoxal homeostasis; Metabolite transport
Effector:	Pyridoxal-5-phosphate
Phylum:	Actinobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 4 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Mycobacterium abscessus ATCC 19977	2	2
Mycobacterium avium 104
Mycobacterium marinum M
Mycobacterium leprae TN
Mycobacterium tuberculosis H37Rv
Mycobacterium smegmatis str. MC2 155	2	2
Mycobacterium vanbaalenii PYR-1
Mycobacterium flavescens PYR-GCK
Mycobacterium sp. JLS

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes										Function

CRON 1.
PF00892	* Mycobacterium abscessus ATCC 19977 Site: position = -40 score = 9.00635 sequence = ACTGCTACCAT-(15)-ATAGTAGCGCT Gene: MAB_0811: Permease of the drug/metabolite transporter (DMT) superfamily	Mycobacterium avium 104	Mycobacterium marinum M	Mycobacterium leprae TN	Mycobacterium tuberculosis H37Rv	* Mycobacterium smegmatis str. MC2 155 Site: position = -16 score = 8.74052 sequence = GGTGCTATCGT-(15)-AGAGTAGCGCT Gene: MSMEG_0425: Permease of the drug/metabolite transporter (DMT) superfamily	Mycobacterium vanbaalenii PYR-1	Mycobacterium flavescens PYR-GCK	Mycobacterium sp. JLS	Permease of the drug/metabolite transporter (DMT) superfamily

CRON 2.
pdxQ	* Mycobacterium abscessus ATCC 19977 Site: position = -46 score = 9.00635 sequence = AGCGCTACTAT-(15)-ATGGTAGCAGT Gene: MAB_0810c: Transcriptional regulator, GntR/MocR family	Mycobacterium avium 104	Mycobacterium marinum M	Mycobacterium leprae TN	Mycobacterium tuberculosis H37Rv	* Mycobacterium smegmatis str. MC2 155 Site: position = -55 score = 8.74052 sequence = AGCGCTACTCT-(15)-ACGATAGCACC Gene: MSMEG_0426: Transcriptional regulator, GntR/MocR family	Mycobacterium vanbaalenii PYR-1	Mycobacterium flavescens PYR-GCK	Mycobacterium sp. JLS	Transcriptional regulator, GntR/MocR family

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --