Regulog PdxQ - Micrococcineae
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Pyridoxine/pyridoxal homeostasis; Metabolite transport |
| Effector: | Pyridoxal-5-phosphate |
| Phylum: | Actinobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Micrococcineae
- By TF family - GntR/MocR
- By effector - Pyridoxal-5-phosphate
- By pathway - Pyridoxine/pyridoxal homeostasis
- By pathway - Metabolite transport
| Genome | Genes | Operons |
|---|---|---|
| Arthrobacter aurescens TC1 | 2 | 2 |
| Arthrobacter chlorophenolicus A6 | 3 | 2 |
| Arthrobacter sp. FB24 | 3 | 2 |
| Beutenbergia cavernae DSM 12333 | ||
| Brachybacterium faecium DSM 4810 | ||
| Brevibacterium linens BL2 | ||
| Clavibacter michiganensis subsp. michiganensis NCPPB 382 | ||
| Janibacter sp. HTCC2649 | 2 | 2 |
| Jonesia denitrificans DSM 20603 | ||
| Kocuria rhizophila DC2201 | ||
| Kytococcus sedentarius DSM 20547 | ||
| Leifsonia xyli subsp. xyli str. CTCB07 | ||
| Renibacterium salmoninarum ATCC 33209 | ||
| Tropheryma whipplei str. Twist |
| Genes | Function | ||||||||||||||
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| CRON 1. | |||||||||||||||
| PF00892 |
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Arthrobacter aurescens TC1 Site: position = -16 score = 9.12848 sequence = ACTGCTATCGT-(15)-ATAGTAGCGCT Gene: AAur_0278: Permease of the drug/metabolite transporter (DMT) superfamily |
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Arthrobacter chlorophenolicus A6 Site: position = -55 score = 9.12848 sequence = ACTGCTATCGT-(15)-ATAGTAGCGCT Gene: Achl_1140: Permease of the drug/metabolite transporter (DMT) superfamily |
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Arthrobacter sp. FB24 Site: position = -55 score = 9.12848 sequence = ACTGCTATCGT-(15)-ATAGTAGCGCT Gene: Arth_2456: Permease of the drug/metabolite transporter (DMT) superfamily |
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Janibacter sp. HTCC2649 Site: position = -103 score = 8.87952 sequence = GGTGCTATCGT-(15)-ATGATAGCGCT Gene: JNB_02485: Permease of the drug/metabolite transporter (DMT) superfamily |
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Gene: Lxx22470: Permease of the drug/metabolite transporter (DMT) superfamily |
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Permease of the drug/metabolite transporter (DMT) superfamily |
| pdxO2 |
Gene: AAur_0277: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
Gene: Achl_1141: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
Gene: Arth_2455: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
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Pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
| CRON 2. | |||||||||||||||
| pdxQ |
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Arthrobacter aurescens TC1 Site: position = -19 score = 9.12848 sequence = AGCGCTACTAT-(15)-ACGATAGCAGT Gene: AAur_0279: Transcriptional regulator, GntR/MocR family |
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Arthrobacter chlorophenolicus A6 Site: position = -19 score = 9.12848 sequence = AGCGCTACTAT-(15)-ACGATAGCAGT Gene: Achl_1139: Transcriptional regulator, GntR/MocR family |
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Arthrobacter sp. FB24 Site: position = -19 score = 9.12848 sequence = AGCGCTACTAT-(15)-ACGATAGCAGT Gene: Arth_2457: Transcriptional regulator, GntR/MocR family |
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Janibacter sp. HTCC2649 Site: position = -19 score = 8.87952 sequence = AGCGCTATCAT-(15)-ACGATAGCACC Gene: JNB_02495: Transcriptional regulator, GntR/MocR family |
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Transcriptional regulator, GntR/MocR family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |