Regulog H16_A0963 - Ralstonia
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | |
| Effector: | |
| Phylum: | Proteobacteria/Beta |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
| Genome | Genes | Operons |
|---|---|---|
| Cupriavidus taiwanensis | 1 | 1 |
| Ralstonia eutropha H16 | 1 | 1 |
| Ralstonia eutropha JMP134 | 1 | 1 |
| Ralstonia metallidurans CH34 | 2 | 1 |
| Ralstonia pickettii 12J | 1 | 1 |
| Ralstonia solanacearum GMI1000 |
| Genes | Function | ||||||
|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||
| PF02627 |
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Cupriavidus taiwanensis Site: position = -142 score = 12.5779 sequence = ATTGGTCTA-(15)-ATTGGCAGT-(4)-GGGGCCAAT Gene: RALTA_A0958: 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein |
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Ralstonia eutropha H16 Site: position = -84 score = 12.5779 sequence = ATTGGTCTA-(15)-ATTGGCAGT-(4)-GGGGCCAAT Gene: H16_A0964: 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein |
*
Ralstonia eutropha JMP134 Site: position = -125 score = 10.3993 sequence = ACCGGTTAC-(15)-ATCGGCCAT-(5)-ATAACCAGT Gene: Reut_A1806: 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein |
*
Ralstonia metallidurans CH34 Site: position = -115 score = 9.72029 sequence = ATTGGTCAC-(16)-ATCGGTACT-(5)-GTCACCACT Gene: Rmet_4317: 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein |
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Ralstonia pickettii 12J Site: position = -92 score = 12.5244 sequence = GGTGGCTAC-(15)-ATTGGCGAT-(5)-GGTGCCACT Gene: Rpic_3612: 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein |
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4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein |
| PF07883 |
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Gene: Rmet_4316: Cupin 2, conserved barrel |
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Cupin 2, conserved barrel |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |