Regulog PA0268 - Pseudomonadaceae
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | |
| Effector: | |
| Phylum: | Proteobacteria/Gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Pseudomonadaceae
- By TF family - GntR/MocR
| Genome | Genes | Operons |
|---|---|---|
| Azotobacter vinelandii AvOP | ||
| Pseudomonas aeruginosa PAO1 | 2 | 1 |
| Pseudomonas entomophila L48 | 1 | 1 |
| Pseudomonas fluorescens Pf-5 | ||
| Pseudomonas mendocina ymp | 2 | 1 |
| Pseudomonas putida KT2440 | ||
| Pseudomonas stutzeri A1501 | ||
| Pseudomonas syringae pv. tomato str. DC3000 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| PF02627 |
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Pseudomonas aeruginosa PAO1 Site: position = -120 score = 14.4141 sequence = ATTGGCTAC-(15)-ATTGGCTCT-(5)-GAAGCCAAA Gene: PA0269: 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein |
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Pseudomonas entomophila L48 Site: position = -92 score = 11.7053 sequence = ATTGGCCTC-(15)-ATTGGCTAT-(5)-GGCGGCAGC Gene: PSEEN3195: 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein |
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Pseudomonas mendocina ymp Site: position = -106 score = 11.8169 sequence = ATTGGCCTC-(15)-ATTGGCTAT-(5)-CAGTCCGTA Gene: Pmen_1084: 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein |
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4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein |
| PF00892 |
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Gene: Pmen_1083: Permease of the drug/metabolite transporter (DMT) superfamily |
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Permease of the drug/metabolite transporter (DMT) superfamily |
| PF07883 |
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Gene: PA0270: Cupin 2, conserved barrel |
Gene: PSEEN1633: Cupin 2, conserved barrel |
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Cupin 2, conserved barrel |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |