Regulog PdxW2 - Burkholderia

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Pyridoxine/pyridoxal homeostasis
Effector:	Pyridoxal-5-phosphate
Phylum:	Proteobacteria/Beta
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 6 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Burkholderia cepacia AMMD	1	1
Burkholderia glumae BGR1	1	1
Burkholderia mallei ATCC 23344	1	1
Burkholderia phymatum STM815	1	1
Burkholderia pseudomallei K96243	1	1
Burkholderia sp. 383	1	1
Burkholderia vietnamiensis G4
Burkholderia xenovorans LB400

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes									Function

CRON 1.
pdxO2	* Burkholderia cepacia AMMD Site: position = -125 score = 11.6519 sequence = TCTGGTCT-(16)-ACCGGCTC-(8)-AAACCAGT Gene: Bamb_4616: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	* Burkholderia glumae BGR1 Site: position = -109 score = 12.2454 sequence = TCTGGCCT-(16)-ACTGGCCC-(8)-AAGCCAGA Gene: bglu_2g19630: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	* Burkholderia mallei ATCC 23344 Site: position = -118 score = 9.90452 sequence = TCCGGTTC-(16)-ACTGGTTC-(8)-AAACCGGT Gene: BMA3062: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	* Burkholderia phymatum STM815 Site: position = -110 score = 11.4059 sequence = TCTGGTTC-(16)-ACTGGATC-(8)-AAACCAGT Gene: Bphy_5850: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	* Burkholderia pseudomallei K96243 Site: position = -118 score = 9.90452 sequence = TCCGGTTC-(16)-ACTGGTTC-(8)-AAACCGGT Gene: BPSL1309: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	* Burkholderia sp. 383 Site: position = -120 score = 11.6519 sequence = TCTGGTCT-(16)-ACCGGCTC-(8)-AAACCAGT Gene: Bcep18194_B0396: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	Burkholderia vietnamiensis G4 Gene: Bcep1808_3517: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	Burkholderia xenovorans LB400 Gene: Bxe_B2937: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	Pyridoxamine 5'-phosphate oxidase-related, FMN-binding

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --