Regulog TauR - Oceanospirillales/Alteromonadales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Taurine utilization |
| Effector: | Taurine |
| Phylum: | Proteobacteria/gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Oceanospirillales/Alteromonadales
- By TF family - GntR/MocR
- By effector - Taurine
- By pathway - Taurine utilization
| Genome | Genes | Operons |
|---|---|---|
| Alcanivorax borkumensis SK2 | ||
| Chromohalobacter salexigens DSM 3043 | 5 | 2 |
| Hahella chejuensis KCTC 2396 | ||
| Marinomonas sp. MWYL1 | ||
| Oceanobacter sp. RED65 | ||
| Oceanospirillum sp. MED92 | 3 | 1 |
| Reinekea sp. MED297 | ||
| Teredinibacter turnerae T7901 | ||
| Saccharophagus degradans 2-40 | ||
| Marinobacter sp. ELB17 | ||
| Marinobacter aqueolei | ||
| Cellvibrio japonicus Ueda107 |
| Genes | Function | ||||||||||||
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| CRON 1. | |||||||||||||
| Csal_0156 |
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Chromohalobacter salexigens DSM 3043 Site: position = -155 score = 8.69253 sequence = CTGGCCAACC-(12)-CTGGCTCTAT Gene: Csal_0156: Amino acid ABC transporter, extracellular solute-binding protein, family 3 |
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Amino acid ABC transporter, extracellular solute-binding protein, family 3 |
| Csal_0155 |
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Gene: Csal_0155: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine |
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Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine |
| Csal_0154 |
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Gene: Csal_0154: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine |
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Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine |
| Csal_0153 |
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Gene: Csal_0153: Amino acid ABC transporter, ATP-binding protein |
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Amino acid ABC transporter, ATP-binding protein |
| CRON 2. | |||||||||||||
| tpa |
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Chromohalobacter salexigens DSM 3043 Site: position = -107 score = 7.32368 sequence = CTGTCACGGC-(12)-CTGGCTCTAT Gene: Csal_0158: Taurine--pyruvate aminotransferase (EC 2.6.1.77) |
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Taurine--pyruvate aminotransferase (EC 2.6.1.77) |
| CRON 3. | |||||||||||||
| tauA |
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Oceanospirillum sp. MED92 Site: position = -94 score = 9.53597 sequence = CTGGACCAAT-(12)-CTGGCTCTAT Gene: MED92_13206: Taurine-binding periplasmic protein TauA |
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Taurine-binding periplasmic protein TauA |
| tauB |
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Gene: MED92_13201: Taurine transport ATP-binding protein TauB |
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Taurine transport ATP-binding protein TauB |
| tauC |
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Gene: MED92_13196: Taurine transport system permease protein TauC |
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Taurine transport system permease protein TauC |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |