Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog TauR - Ralstonia

Properties
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process: Taurine utilization
Effector: Taurine
Phylum: Proteobacteria/Beta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 9 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Cupriavidus taiwanensis 10 4
Ralstonia eutropha H16 8 3
Ralstonia eutropha JMP134 5 2
Ralstonia metallidurans CH34
Ralstonia pickettii 12J
Ralstonia solanacearum GMI1000
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
tauX
*
Cupriavidus taiwanensis

Site:
position = -114
score = 9.47712
sequence = CTGGCCCAAG-(13)-CTGGCGCTAC

Gene: RALTA_B1591: Putative small subunit of taurine dehydrogenase
*
Ralstonia eutropha H16

Site:
position = -113
score = 9.47712
sequence = CTGGCCCAAG-(13)-CTGGCGCTAC

Gene: H16_B1892: Putative small subunit of taurine dehydrogenase
*
Ralstonia eutropha JMP134

Site:
position = -148
score = 9.45318
sequence = CTGGCCCAAG-(13)-CTGGTCCTAC

Gene: Reut_B3751: Putative small subunit of taurine dehydrogenase
 
Ralstonia metallidurans CH34
 
Ralstonia pickettii 12J
 
Ralstonia solanacearum GMI1000
Putative small subunit of taurine dehydrogenase
tauY
 
Cupriavidus taiwanensis

Gene: RALTA_B1592: Taurine dehydrogenase, large subunit
 
Ralstonia eutropha H16

Gene: H16_B1893: Taurine dehydrogenase, large subunit
 
Ralstonia eutropha JMP134

Gene: Reut_B3750: Taurine dehydrogenase, large subunit
 
Ralstonia metallidurans CH34
 
Ralstonia pickettii 12J
 
Ralstonia solanacearum GMI1000
Taurine dehydrogenase, large subunit
 
CRON 2.
tauM
*
Cupriavidus taiwanensis

Site:
position = -43
score = 6.56724
sequence = GTGGCCGCAT-(13)-CTGGACCGGA

Gene: RALTA_A1247: TRAP-type taurine transporter, small permease component
 
Ralstonia eutropha H16

Gene: H16_A1326: TRAP-type taurine transporter, small permease component
 
Ralstonia eutropha JMP134

Gene: Reut_A1264: TRAP-type taurine transporter, small permease component
 
Ralstonia metallidurans CH34

Gene: Rmet_1148: TRAP-type taurine transporter, small permease component
 
Ralstonia pickettii 12J
 
Ralstonia solanacearum GMI1000
TRAP-type taurine transporter, small permease component
tauL
 
Cupriavidus taiwanensis

Gene: RALTA_A1248: TRAP-type taurine transporter, large permease component
 
Ralstonia eutropha H16

Gene: H16_A1327: TRAP-type taurine transporter, large permease component
 
Ralstonia eutropha JMP134

Gene: Reut_A1265: TRAP-type taurine transporter, large permease component
 
Ralstonia metallidurans CH34

Gene: Rmet_1149: TRAP-type taurine transporter, large permease component
 
Ralstonia pickettii 12J
 
Ralstonia solanacearum GMI1000
TRAP-type taurine transporter, large permease component
tauK
 
Cupriavidus taiwanensis

Gene: RALTA_A1249: TRAP-type taurine transporter, periplasmatic component
 
Ralstonia eutropha H16

Gene: H16_A1328: TRAP-type taurine transporter, periplasmatic component
 
Ralstonia eutropha JMP134

Gene: Reut_A1266: TRAP-type taurine transporter, periplasmatic component
 
Ralstonia metallidurans CH34

Gene: Rmet_1150: TRAP-type taurine transporter, periplasmatic component
 
Ralstonia pickettii 12J
 
Ralstonia solanacearum GMI1000
TRAP-type taurine transporter, periplasmatic component
 
CRON 3.
tauC2
*
Cupriavidus taiwanensis

Site:
position = -57
score = 7.40373
sequence = CTGGCCGAAG-(13)-CTGGCGCAAG

Gene: RALTA_B1998: Taurine transport system permease protein TauC
*
Ralstonia eutropha H16

Site:
position = -57
score = 7.40373
sequence = CTGGCCGAAG-(13)-CTGGCGCAAG

Gene: H16_B2225: Taurine transport system permease protein TauC
 
Ralstonia eutropha JMP134
 
Ralstonia metallidurans CH34
 
Ralstonia pickettii 12J
 
Ralstonia solanacearum GMI1000
Taurine transport system permease protein TauC
tauB2
 
Cupriavidus taiwanensis

Gene: RALTA_B1999: Taurine transport ATP-binding protein TauB
 
Ralstonia eutropha H16

Gene: H16_B2226: Taurine transport ATP-binding protein TauB
 
Ralstonia eutropha JMP134
 
Ralstonia metallidurans CH34
 
Ralstonia pickettii 12J
 
Ralstonia solanacearum GMI1000
Taurine transport ATP-binding protein TauB
tauD
 
Cupriavidus taiwanensis

Gene: RALTA_B2000: Alpha-ketoglutarate-dependent taurine dioxygenase (EC 1.14.11.17)
 
Ralstonia eutropha H16

Gene: H16_B2227: Alpha-ketoglutarate-dependent taurine dioxygenase (EC 1.14.11.17)
 
Ralstonia eutropha JMP134
 
Ralstonia metallidurans CH34
 
Ralstonia pickettii 12J
 
Ralstonia solanacearum GMI1000
Alpha-ketoglutarate-dependent taurine dioxygenase (EC 1.14.11.17)
 
CRON 4.
tauA
*
Cupriavidus taiwanensis

Site:
position = -102
score = 8.58242
sequence = CTGGCCCCAC-(13)-CTGGTCCTAT

Gene: RALTA_B0795: Taurine-binding periplasmic protein TauA
*
Ralstonia eutropha H16

Site:
position = -103
score = 8.79776
sequence = CTGGTCCCAG-(13)-CTGGTCCTAT

Gene: H16_B0888: Taurine-binding periplasmic protein TauA
*
Ralstonia eutropha JMP134

Site:
position = -289
score = 8.86574
sequence = CTGGACCCAA-(13)-CTGGCACTAA

Gene: Reut_A1472: Taurine-binding periplasmic protein TauA
 
Ralstonia metallidurans CH34
 
Ralstonia pickettii 12J

Gene: Rpic_2885: Taurine-binding periplasmic protein TauA
 
Ralstonia solanacearum GMI1000
Taurine-binding periplasmic protein TauA
tauB
 
Cupriavidus taiwanensis

Gene: RALTA_B0794: Taurine transport ATP-binding protein TauB
 
Ralstonia eutropha H16

Gene: H16_B0889: Taurine transport ATP-binding protein TauB
 
Ralstonia eutropha JMP134

Gene: Reut_A1471: Taurine transport ATP-binding protein TauB
 
Ralstonia metallidurans CH34
 
Ralstonia pickettii 12J

Gene: Rpic_2884: Taurine transport ATP-binding protein TauB
 
Ralstonia solanacearum GMI1000
Taurine transport ATP-binding protein TauB
tauC
 
Cupriavidus taiwanensis

Gene: RALTA_B0793: Taurine transport system permease protein TauC
 
Ralstonia eutropha H16

Gene: H16_B0890: Taurine transport system permease protein TauC
 
Ralstonia eutropha JMP134

Gene: Reut_A1470: Taurine transport system permease protein TauC
 
Ralstonia metallidurans CH34
 
Ralstonia pickettii 12J

Gene: Rpic_2883: Taurine transport system permease protein TauC
 
Ralstonia solanacearum GMI1000
Taurine transport system permease protein TauC
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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