Regulog TauR - Burkholderia

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Taurine utilization
Effector:	Taurine
Phylum:	Proteobacteria/Beta
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 9 sites [see more]

Member of regulog collections

By taxonomy - Burkholderia
By TF family - GntR/MocR
By effector - Taurine
By pathway - Taurine utilization

Statistics of regulated genes
Genome	Genes	Operons
Burkholderia cepacia AMMD
Burkholderia glumae BGR1
Burkholderia mallei ATCC 23344
Burkholderia phymatum STM815	8	3
Burkholderia pseudomallei K96243
Burkholderia sp. 383	8	3
Burkholderia vietnamiensis G4
Burkholderia xenovorans LB400	8	3

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes									Function

CRON 1.
rimI	Burkholderia cepacia AMMD	Burkholderia glumae BGR1	Burkholderia mallei ATCC 23344	Burkholderia phymatum STM815	Burkholderia pseudomallei K96243	* Burkholderia sp. 383 Site: position = -166 score = 8.23302 sequence = GTGGACTCAA-(13)-CTGGCACTAC Gene: Bcep18194_B1989: GCN5-related N-acetyltransferase	Burkholderia vietnamiensis G4	Burkholderia xenovorans LB400	GCN5-related N-acetyltransferase
phnY	Burkholderia cepacia AMMD Gene: Bamb_3193: phosphonoacetaldehyde dehydrogenase	Burkholderia glumae BGR1	Burkholderia mallei ATCC 23344	Burkholderia phymatum STM815	Burkholderia pseudomallei K96243	2 Burkholderia sp. 383 Gene: Bcep18194_A6492: phosphonoacetaldehyde dehydrogenase Gene: Bcep18194_B1988: phosphonoacetaldehyde dehydrogenase	Burkholderia vietnamiensis G4	Burkholderia xenovorans LB400	phosphonoacetaldehyde dehydrogenase

CRON 2.
tauX	Burkholderia cepacia AMMD	Burkholderia glumae BGR1	Burkholderia mallei ATCC 23344	* Burkholderia phymatum STM815 Site: position = -130 score = 9.2758 sequence = CTGGCCCAAG-(13)-CTGGAACTAC Gene: Bphy_6225: Putative small subunit of taurine dehydrogenase	Burkholderia pseudomallei K96243	* Burkholderia sp. 383 Site: position = -127 score = 9.47712 sequence = CTGGCCCAAG-(13)-CTGGCGCTAC Gene: Bcep18194_B1992: Putative small subunit of taurine dehydrogenase	Burkholderia vietnamiensis G4	* Burkholderia xenovorans LB400 Site: position = -128 score = 8.46774 sequence = CTGCACCAGG-(13)-CTGGACCTAC Gene: Bxe_B0684: Putative small subunit of taurine dehydrogenase	Putative small subunit of taurine dehydrogenase
xsc	Burkholderia cepacia AMMD	Burkholderia glumae BGR1	Burkholderia mallei ATCC 23344	2 Burkholderia phymatum STM815* Gene: Bphy_6210: Sulfoacetaldehyde acetyltransferase (EC 2.3.3.15) Site: position = -373 score = 8.81596 sequence = CTGGCCCAGG-(13)-CTGGTGCTAC Gene: Bphy_6205: Sulfoacetaldehyde acetyltransferase (EC 2.3.3.15)	Burkholderia pseudomallei K96243	Burkholderia sp. 383 Gene: Bcep18194_B1993: Sulfoacetaldehyde acetyltransferase (EC 2.3.3.15)	Burkholderia vietnamiensis G4	* Burkholderia xenovorans LB400 Site: position = -327 score = 8.57432 sequence = CTGGACTCAG-(13)-CTGGCTCTAC Gene: Bxe_B0691: Sulfoacetaldehyde acetyltransferase (EC 2.3.3.15)	Sulfoacetaldehyde acetyltransferase (EC 2.3.3.15)
pta	Burkholderia cepacia AMMD	Burkholderia glumae BGR1	Burkholderia mallei ATCC 23344	Burkholderia phymatum STM815 Gene: Bphy_6206: Phosphate acetyltransferase (EC 2.3.1.8)	Burkholderia pseudomallei K96243	Burkholderia sp. 383 Gene: Bcep18194_B1994: Phosphate acetyltransferase (EC 2.3.1.8)	Burkholderia vietnamiensis G4	Burkholderia xenovorans LB400 Gene: Bxe_B0690: Phosphate acetyltransferase (EC 2.3.1.8)	Phosphate acetyltransferase (EC 2.3.1.8)
tauE	Burkholderia cepacia AMMD	Burkholderia glumae BGR1	Burkholderia mallei ATCC 23344	Burkholderia phymatum STM815	Burkholderia pseudomallei K96243	Burkholderia sp. 383 Gene: Bcep18194_B1995: Sulfite exporter	Burkholderia vietnamiensis G4	Burkholderia xenovorans LB400 Gene: Bxe_B0689: Sulfite exporter	Sulfite exporter
tauY	Burkholderia cepacia AMMD	Burkholderia glumae BGR1	Burkholderia mallei ATCC 23344	Burkholderia phymatum STM815 Gene: Bphy_6224: Taurine dehydrogenase, large subunit	Burkholderia pseudomallei K96243	* Burkholderia sp. 383 Site: position = -251 score = 9.49923 sequence = CTGGTCCAAG-(13)-CTGGCCCTAC Gene: Bcep18194_B2003: Taurine dehydrogenase, large subunit	Burkholderia vietnamiensis G4	Burkholderia xenovorans LB400 Gene: Bxe_B0685: Taurine dehydrogenase, large subunit	Taurine dehydrogenase, large subunit
gabP	Burkholderia cepacia AMMD	Burkholderia glumae BGR1	Burkholderia mallei ATCC 23344	Burkholderia phymatum STM815 Gene: Bphy_6223: Gamma-aminobutyrate permease	Burkholderia pseudomallei K96243	Burkholderia sp. 383 Gene: Bcep18194_B2002: Gamma-aminobutyrate permease	Burkholderia vietnamiensis G4	Burkholderia xenovorans LB400 Gene: Bxe_B0686: Gamma-aminobutyrate permease	Gamma-aminobutyrate permease

CRON 3.
tauC	Burkholderia cepacia AMMD	Burkholderia glumae BGR1 Gene: bglu_1g32000: Taurine transport system permease protein TauC	Burkholderia mallei ATCC 23344 Gene: BMAA1580: Taurine transport system permease protein TauC	2 Burkholderia phymatum STM815* Site: position = -269 score = 7.73723 sequence = CTGGATCCAT-(13)-CTGGTACTAC Gene: Bphy_6203: Taurine transport system permease protein TauC Gene: Bphy_6082: Taurine transport system permease protein TauC	Burkholderia pseudomallei K96243 Gene: BPSS1572: Taurine transport system permease protein TauC	Burkholderia sp. 383 Gene: Bcep18194_A6225: Taurine transport system permease protein TauC	Burkholderia vietnamiensis G4 Gene: Bcep1808_2980: Taurine transport system permease protein TauC	3 Burkholderia xenovorans LB400 Gene: Bxe_C0085: Taurine transport system permease protein TauC Gene: Bxe_B0692: Taurine transport system permease protein TauC Gene: Bxe_A4207: Taurine transport system permease protein TauC	Taurine transport system permease protein TauC
tauA	Burkholderia cepacia AMMD	Burkholderia glumae BGR1 Gene: bglu_1g32020: Taurine-binding periplasmic protein TauA	Burkholderia mallei ATCC 23344 Gene: BMAA1582: Taurine-binding periplasmic protein TauA	2 Burkholderia phymatum STM815 Gene: Bphy_6202: Taurine-binding periplasmic protein TauA Gene: Bphy_6080: Taurine-binding periplasmic protein TauA	Burkholderia pseudomallei K96243 Gene: BPSS1574: Taurine-binding periplasmic protein TauA	Burkholderia sp. 383 Gene: Bcep18194_A6227: Taurine-binding periplasmic protein TauA	Burkholderia vietnamiensis G4 Gene: Bcep1808_2982: Taurine-binding periplasmic protein TauA	3 Burkholderia xenovorans LB400* Gene: Bxe_C0087: Taurine-binding periplasmic protein TauA Gene: Bxe_A4209: Taurine-binding periplasmic protein TauA Site: position = -117 score = 8.05727 sequence = GTGGACTCAA-(13)-CTGGCACTAA Gene: Bxe_B0694: Taurine-binding periplasmic protein TauA	Taurine-binding periplasmic protein TauA
tauB	Burkholderia cepacia AMMD	Burkholderia glumae BGR1 Gene: bglu_1g32010: Taurine transport ATP-binding protein TauB	Burkholderia mallei ATCC 23344 Gene: BMAA1581: Taurine transport ATP-binding protein TauB	2 Burkholderia phymatum STM815 Gene: Bphy_6201: Taurine transport ATP-binding protein TauB Gene: Bphy_6081: Taurine transport ATP-binding protein TauB	Burkholderia pseudomallei K96243 Gene: BPSS1573: Taurine transport ATP-binding protein TauB	Burkholderia sp. 383 Gene: Bcep18194_A6226: Taurine transport ATP-binding protein TauB	Burkholderia vietnamiensis G4 Gene: Bcep1808_2981: Taurine transport ATP-binding protein TauB	3 Burkholderia xenovorans LB400 Gene: Bxe_C0086: Taurine transport ATP-binding protein TauB Gene: Bxe_A4208: Taurine transport ATP-binding protein TauB Gene: Bxe_B0693: Taurine transport ATP-binding protein TauB	Taurine transport ATP-binding protein TauB

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog TauR - Burkholderia

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --