Regulog TauR - Burkholderia
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Taurine utilization |
| Effector: | Taurine |
| Phylum: | Proteobacteria/Beta |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Burkholderia
- By TF family - GntR/MocR
- By effector - Taurine
- By pathway - Taurine utilization
| Genome | Genes | Operons |
|---|---|---|
| Burkholderia cepacia AMMD | ||
| Burkholderia glumae BGR1 | ||
| Burkholderia mallei ATCC 23344 | ||
| Burkholderia phymatum STM815 | 8 | 3 |
| Burkholderia pseudomallei K96243 | ||
| Burkholderia sp. 383 | 8 | 3 |
| Burkholderia vietnamiensis G4 | ||
| Burkholderia xenovorans LB400 | 8 | 3 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| rimI |
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*
Burkholderia sp. 383 Site: position = -166 score = 8.23302 sequence = GTGGACTCAA-(13)-CTGGCACTAC Gene: Bcep18194_B1989: GCN5-related N-acetyltransferase |
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GCN5-related N-acetyltransferase |
| phnY |
Gene: Bamb_3193: phosphonoacetaldehyde dehydrogenase |
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2
Burkholderia sp. 383 Gene: Bcep18194_A6492: phosphonoacetaldehyde dehydrogenase Gene: Bcep18194_B1988: phosphonoacetaldehyde dehydrogenase |
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phosphonoacetaldehyde dehydrogenase |
| CRON 2. | |||||||||
| tauX |
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*
Burkholderia phymatum STM815 Site: position = -130 score = 9.2758 sequence = CTGGCCCAAG-(13)-CTGGAACTAC Gene: Bphy_6225: Putative small subunit of taurine dehydrogenase |
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*
Burkholderia sp. 383 Site: position = -127 score = 9.47712 sequence = CTGGCCCAAG-(13)-CTGGCGCTAC Gene: Bcep18194_B1992: Putative small subunit of taurine dehydrogenase |
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*
Burkholderia xenovorans LB400 Site: position = -128 score = 8.46774 sequence = CTGCACCAGG-(13)-CTGGACCTAC Gene: Bxe_B0684: Putative small subunit of taurine dehydrogenase |
Putative small subunit of taurine dehydrogenase |
| xsc |
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*2
Burkholderia phymatum STM815 Gene: Bphy_6210: Sulfoacetaldehyde acetyltransferase (EC 2.3.3.15) Site: position = -373 score = 8.81596 sequence = CTGGCCCAGG-(13)-CTGGTGCTAC Gene: Bphy_6205: Sulfoacetaldehyde acetyltransferase (EC 2.3.3.15) |
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Gene: Bcep18194_B1993: Sulfoacetaldehyde acetyltransferase (EC 2.3.3.15) |
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*
Burkholderia xenovorans LB400 Site: position = -327 score = 8.57432 sequence = CTGGACTCAG-(13)-CTGGCTCTAC Gene: Bxe_B0691: Sulfoacetaldehyde acetyltransferase (EC 2.3.3.15) |
Sulfoacetaldehyde acetyltransferase (EC 2.3.3.15) |
| pta |
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Gene: Bphy_6206: Phosphate acetyltransferase (EC 2.3.1.8) |
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Gene: Bcep18194_B1994: Phosphate acetyltransferase (EC 2.3.1.8) |
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Gene: Bxe_B0690: Phosphate acetyltransferase (EC 2.3.1.8) |
Phosphate acetyltransferase (EC 2.3.1.8) |
| tauE |
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Gene: Bcep18194_B1995: Sulfite exporter |
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Gene: Bxe_B0689: Sulfite exporter |
Sulfite exporter |
| tauY |
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Gene: Bphy_6224: Taurine dehydrogenase, large subunit |
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*
Burkholderia sp. 383 Site: position = -251 score = 9.49923 sequence = CTGGTCCAAG-(13)-CTGGCCCTAC Gene: Bcep18194_B2003: Taurine dehydrogenase, large subunit |
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Gene: Bxe_B0685: Taurine dehydrogenase, large subunit |
Taurine dehydrogenase, large subunit |
| gabP |
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Gene: Bphy_6223: Gamma-aminobutyrate permease |
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Gene: Bcep18194_B2002: Gamma-aminobutyrate permease |
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Gene: Bxe_B0686: Gamma-aminobutyrate permease |
Gamma-aminobutyrate permease |
| CRON 3. | |||||||||
| tauC |
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Gene: bglu_1g32000: Taurine transport system permease protein TauC |
Gene: BMAA1580: Taurine transport system permease protein TauC |
*2
Burkholderia phymatum STM815 Site: position = -269 score = 7.73723 sequence = CTGGATCCAT-(13)-CTGGTACTAC Gene: Bphy_6203: Taurine transport system permease protein TauC Gene: Bphy_6082: Taurine transport system permease protein TauC |
Gene: BPSS1572: Taurine transport system permease protein TauC |
Gene: Bcep18194_A6225: Taurine transport system permease protein TauC |
Gene: Bcep1808_2980: Taurine transport system permease protein TauC |
3
Burkholderia xenovorans LB400 Gene: Bxe_C0085: Taurine transport system permease protein TauC Gene: Bxe_B0692: Taurine transport system permease protein TauC Gene: Bxe_A4207: Taurine transport system permease protein TauC |
Taurine transport system permease protein TauC |
| tauA |
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Gene: bglu_1g32020: Taurine-binding periplasmic protein TauA |
Gene: BMAA1582: Taurine-binding periplasmic protein TauA |
2
Burkholderia phymatum STM815 Gene: Bphy_6202: Taurine-binding periplasmic protein TauA Gene: Bphy_6080: Taurine-binding periplasmic protein TauA |
Gene: BPSS1574: Taurine-binding periplasmic protein TauA |
Gene: Bcep18194_A6227: Taurine-binding periplasmic protein TauA |
Gene: Bcep1808_2982: Taurine-binding periplasmic protein TauA |
*3
Burkholderia xenovorans LB400 Gene: Bxe_C0087: Taurine-binding periplasmic protein TauA Gene: Bxe_A4209: Taurine-binding periplasmic protein TauA Site: position = -117 score = 8.05727 sequence = GTGGACTCAA-(13)-CTGGCACTAA Gene: Bxe_B0694: Taurine-binding periplasmic protein TauA |
Taurine-binding periplasmic protein TauA |
| tauB |
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Gene: bglu_1g32010: Taurine transport ATP-binding protein TauB |
Gene: BMAA1581: Taurine transport ATP-binding protein TauB |
2
Burkholderia phymatum STM815 Gene: Bphy_6201: Taurine transport ATP-binding protein TauB Gene: Bphy_6081: Taurine transport ATP-binding protein TauB |
Gene: BPSS1573: Taurine transport ATP-binding protein TauB |
Gene: Bcep18194_A6226: Taurine transport ATP-binding protein TauB |
Gene: Bcep1808_2981: Taurine transport ATP-binding protein TauB |
3
Burkholderia xenovorans LB400 Gene: Bxe_C0086: Taurine transport ATP-binding protein TauB Gene: Bxe_A4208: Taurine transport ATP-binding protein TauB Gene: Bxe_B0693: Taurine transport ATP-binding protein TauB |
Taurine transport ATP-binding protein TauB |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |