Regulog Bamb_5788 - Burkholderia
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | |
| Effector: | |
| Phylum: | Proteobacteria/Beta |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Burkholderia
- By TF family - GntR/MocR
| Genome | Genes | Operons |
|---|---|---|
| Burkholderia cepacia AMMD | 1 | 1 |
| Burkholderia glumae BGR1 | 3 | 2 |
| Burkholderia mallei ATCC 23344 | ||
| Burkholderia phymatum STM815 | ||
| Burkholderia pseudomallei K96243 | ||
| Burkholderia sp. 383 | 2 | 1 |
| Burkholderia vietnamiensis G4 | ||
| Burkholderia xenovorans LB400 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| PF01370 |
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Burkholderia cepacia AMMD Site: position = -163 score = 12.6267 sequence = GTATGGACCAGT-(12)-TCTTGGCACTTA-(3)-GATAGGACATGA Gene: Bamb_5787: NAD-dependent epimerase/dehydratase |
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Burkholderia glumae BGR1 Site: position = -156 score = 11.9018 sequence = CCATGTCCTGGT-(12)-ATTTGGACCTTA-(1)-GGCGGGCCATCG Gene: bglu_1g30110: NAD-dependent epimerase/dehydratase |
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Gene: Bphy_5347: NAD-dependent epimerase/dehydratase |
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NAD-dependent epimerase/dehydratase |
| CRON 2. | |||||||||
| PF00583 |
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Burkholderia glumae BGR1 Site: position = -92 score = 10.4332 sequence = CGATGTCCTAGC-(12)-TTCTGGCTCTGT-(2)-GCCGTGACGTGG Gene: bglu_2g19120: GCN5-related N-acetyltransferase |
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Burkholderia sp. 383 Site: position = -88 score = 12.6847 sequence = TCATGTCCCAGT-(12)-TTTTGGACCTTC-(2)-GATACGCCATCC Gene: Bcep18194_B3075: GCN5-related N-acetyltransferase |
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GCN5-related N-acetyltransferase |
| PF02525 |
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Gene: bglu_2g19110: FMN-dependent NADH-azoreductase |
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Gene: Bcep18194_B3076: FMN-dependent NADH-azoreductase |
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FMN-dependent NADH-azoreductase |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |