Regulog Sbal_4072 - Shewanellaceae

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum:	Proteobacteria/Gamma
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 2 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By TF family - GntR/MocR

Statistics of regulated genes
Genome	Genes	Operons
Shewanella amazonensis SB2B
Shewanella baltica OS155	4	2
Shewanella denitrificans OS217
Shewanella frigidimarina NCIMB 400
Shewanella halifaxensis HAW-EB4
Shewanella loihica PV-4
Shewanella oneidensis MR-1
Shewanella pealeana ATCC 700345
Shewanella piezotolerans WP3
Shewanella putrefaciens CN-32
Shewanella sediminis HAW-EB3
Shewanella sp ANA-3
Shewanella sp MR-4
Shewanella sp MR-7
Shewanella sp W3-18-1
Shewanella woodyi ATCC 51908

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes																	Function

CRON 1.
PF02525	Shewanella amazonensis SB2B	* Shewanella baltica OS155 Site: position = -117 score = 12.2159 sequence = ACATGGTCCACT-(12)-TTATGGCTCTTA-(1)-TATGAGCCATGG Gene: Sbal_4073: FMN-dependent NADH-azoreductase	Shewanella denitrificans OS217	Shewanella frigidimarina NCIMB 400	Shewanella halifaxensis HAW-EB4	Shewanella loihica PV-4	Shewanella oneidensis MR-1	Shewanella pealeana ATCC 700345	Shewanella piezotolerans WP3	Shewanella putrefaciens CN-32	Shewanella sediminis HAW-EB3	Shewanella sp ANA-3	Shewanella sp MR-4	Shewanella sp MR-7	Shewanella sp W3-18-1	Shewanella woodyi ATCC 51908	FMN-dependent NADH-azoreductase
PF00578	Shewanella amazonensis SB2B Gene: Sama_2714: AhpC/TSA family protein	Shewanella baltica OS155 Gene: Sbal_4074: AhpC/TSA family protein	Shewanella denitrificans OS217	Shewanella frigidimarina NCIMB 400	Shewanella halifaxensis HAW-EB4	Shewanella loihica PV-4	Shewanella oneidensis MR-1	Shewanella pealeana ATCC 700345	Shewanella piezotolerans WP3	Shewanella putrefaciens CN-32	Shewanella sediminis HAW-EB3	Shewanella sp ANA-3	Shewanella sp MR-4	Shewanella sp MR-7	Shewanella sp W3-18-1	Shewanella woodyi ATCC 51908	AhpC/TSA family protein
COG4232	Shewanella amazonensis SB2B Gene: Sama_2713: putative thiol:disulfide interchange protein	Shewanella baltica OS155 Gene: Sbal_4075: putative thiol:disulfide interchange protein	Shewanella denitrificans OS217	Shewanella frigidimarina NCIMB 400	Shewanella halifaxensis HAW-EB4	Shewanella loihica PV-4	Shewanella oneidensis MR-1	Shewanella pealeana ATCC 700345	Shewanella piezotolerans WP3	Shewanella putrefaciens CN-32	Shewanella sediminis HAW-EB3	Shewanella sp ANA-3	Shewanella sp MR-4	Shewanella sp MR-7	Shewanella sp W3-18-1	Shewanella woodyi ATCC 51908	putative thiol:disulfide interchange protein

CRON 2.
PF00583	Shewanella amazonensis SB2B	* Shewanella baltica OS155 Site: position = -91 score = 12.0041 sequence = TCATGGCCTAGT-(12)-TTTTGGCCCTGT-(2)-CTTAAGTCATTG Gene: Sbal_4076: GCN5-related N-acetyltransferase	Shewanella denitrificans OS217 Gene: Sden_2488: GCN5-related N-acetyltransferase	Shewanella frigidimarina NCIMB 400	Shewanella halifaxensis HAW-EB4	Shewanella loihica PV-4	Shewanella oneidensis MR-1	Shewanella pealeana ATCC 700345	Shewanella piezotolerans WP3	Shewanella putrefaciens CN-32	Shewanella sediminis HAW-EB3	Shewanella sp ANA-3	Shewanella sp MR-4	Shewanella sp MR-7	Shewanella sp W3-18-1	Shewanella woodyi ATCC 51908	GCN5-related N-acetyltransferase

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog Sbal_4072 - Shewanellaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --