Regulog H16_B1411 - Ralstonia
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | |
| Effector: | |
| Phylum: | Proteobacteria/Beta |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
| Genome | Genes | Operons |
|---|---|---|
| Cupriavidus taiwanensis | ||
| Ralstonia eutropha H16 | 6 | 2 |
| Ralstonia eutropha JMP134 | 2 | 1 |
| Ralstonia metallidurans CH34 | ||
| Ralstonia pickettii 12J | ||
| Ralstonia solanacearum GMI1000 |
| Genes | Function | ||||||
|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||
| PF00583 |
Gene: RALTA_B1549: GCN5-related N-acetyltransferase |
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Ralstonia eutropha H16 Site: position = -93 score = 9.51881 sequence = CGATGGCCTAGT-(12)-ACATGTGCCTGT-(2)-ACTGTGTCATCG Gene: H16_B1407: GCN5-related N-acetyltransferase |
Gene: Reut_A3274: GCN5-related N-acetyltransferase |
Gene: Rmet_3439: GCN5-related N-acetyltransferase |
Gene: Rpic_3957: GCN5-related N-acetyltransferase |
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GCN5-related N-acetyltransferase |
| PF05368 |
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Gene: H16_B1406: NmrA-like domain |
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Ralstonia eutropha JMP134 Site: position = -157 score = 11.1028 sequence = ACTTGGCCTAGT-(12)-TCTTGGCCCTTA-(2)-CATAGGGCATGA Gene: Reut_A1579: NmrA-like domain |
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NmrA-like domain |
| PF02627 |
Gene: RALTA_A1404: Carboxymuconolactone decarboxylase |
Gene: H16_B1405: Carboxymuconolactone decarboxylase |
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Carboxymuconolactone decarboxylase |
| PF07883 |
Gene: RALTA_A1405: Cupin 2, conserved barrel |
Gene: H16_B1404: Cupin 2, conserved barrel |
Gene: Reut_A1578: Cupin 2, conserved barrel |
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Cupin 2, conserved barrel |
| CRON 2. | |||||||
| h16_B1410 |
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Ralstonia eutropha H16 Site: position = -163 score = 9.20808 sequence = CGATGGCCCAGT-(12)-ACATGTGCCTGT-(2)-ACTGAGTCATCG Gene: H16_B1410: Non-heme chloroperoxidase |
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Non-heme chloroperoxidase |
| h16_B1409 |
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Gene: H16_B1409: amidase related to nicotinamidase |
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amidase related to nicotinamidase |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |