Regulog ArgR - Streptomycetaceae
| Regulator type: | Transcription factor |
| Regulator family: | ArgR |
| Regulation mode: | repressor (activator) |
| Biological process: | Arginine biosynthesis |
| Effector: | Arginine |
| Phylum: | Actinobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - ArgR
- By taxonomy - Streptomycetaceae
- By TF family - ArgR
- By effector - Arginine
- By pathway - Arginine biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Streptomyces avermitilis MA-4680 | 10 | 5 |
| Streptomyces coelicolor A3(2) | 10 | 6 |
| Streptomyces griseus subsp. griseus NBRC 13350 | 9 | 4 |
| Streptomyces scabiei 87.22 | 8 | 4 |
| Genes | Function | ||||
|---|---|---|---|---|---|
| CRON 1. | |||||
| argG |
*2
Streptomyces avermitilis MA-4680 Site: position = -36 score = 3.83321 sequence = TCATGCAGAGCCCTGCATAC Site: position = -26 score = 5.17327 sequence = CCCTGCATACTCATGCATGT Gene: SAV_6778: Argininosuccinate synthase (EC 6.3.4.5) Site: position = -37 score = 4.612 sequence = CCTTGCATGAAAATGCGCGA Gene: SAV_801: Argininosuccinate synthase (EC 6.3.4.5) |
*
Streptomyces coelicolor A3(2) Site: position = -37 score = 5.33603 sequence = CTTTGCATGGTCATGCGTAA Site: position = -27 score = 4.30436 sequence = TCATGCGTAATGATGCATAC Gene: SCO7036: Argininosuccinate synthase (EC 6.3.4.5) |
*2
Streptomyces griseus subsp. griseus NBRC 13350 Site: position = -27 score = 5.06639 sequence = TCATGCATAAGAATGCATAC Site: position = -37 score = 5.3195 sequence = TGTTGCATGATCATGCATAA Gene: SGR_3668: Argininosuccinate synthase (EC 6.3.4.5) Site: position = -47 score = 4.39924 sequence = GACTGCATAGTTATACCCAT Gene: SGR_5966: Argininosuccinate synthase (EC 6.3.4.5) |
*
Streptomyces scabiei 87.22 Site: position = -37 score = 5.53739 sequence = CTTTGCATGATCATGCGTTG Site: position = -27 score = 3.74374 sequence = TCATGCGTTGGCGTGCATAA Gene: SCAB_44121: Argininosuccinate synthase (EC 6.3.4.5) |
Argininosuccinate synthase (EC 6.3.4.5) |
| argH |
Gene: SAV_6779: Argininosuccinate lyase (EC 4.3.2.1) |
*
Streptomyces coelicolor A3(2) Site: position = -59 score = 3.87606 sequence = ACATGCAGAGTTCTGCATAC Site: position = -49 score = 5.27259 sequence = TTCTGCATACTCATGCATGA Gene: SCO1570: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: SGR_5967: Argininosuccinate lyase (EC 4.3.2.1) |
*
Streptomyces scabiei 87.22 Site: position = -71 score = 3.97539 sequence = TCATGCAGAGTTCTGCATAC Site: position = -61 score = 5.27259 sequence = TTCTGCATACTCATGCATGA Gene: SCAB_74301: Argininosuccinate lyase (EC 4.3.2.1) |
Argininosuccinate lyase (EC 4.3.2.1) |
| CRON 2. | |||||
| SCO1086 |
*
Streptomyces avermitilis MA-4680 Site: position = -44 score = 4.55262 sequence = CGATGCATAGATATGCGATC Gene: SAV_1487: Putative transglutaminase |
*
Streptomyces coelicolor A3(2) Site: position = -44 score = 4.89149 sequence = CACTGCATAGGTATGCGTTC Gene: SCO1086: Putative transglutaminase |
*
Streptomyces griseus subsp. griseus NBRC 13350 Site: position = -70 score = 4.49248 sequence = TCGCGCATAACCATGCGACC Gene: SGR_6519: Putative transglutaminase |
*
Streptomyces scabiei 87.22 Site: position = -71 score = 4.23073 sequence = GACTGCATAGATATACGGTC Gene: SCAB_82621: Putative transglutaminase |
Putative transglutaminase |
| CRON 3. | |||||
| argC |
*
Streptomyces avermitilis MA-4680 Site: position = -55 score = 4.22732 sequence = GATTGCATAAACGTGCAGCG Site: position = -35 score = 4.58836 sequence = AAACGTATAGTCATGCCATC Gene: SAV_6763: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Streptomyces coelicolor A3(2) Site: position = -57 score = 4.47812 sequence = CATTGCATAAACGTGCATCG Site: position = -37 score = 4.07816 sequence = GCACGTATAGTCATGCTCTC Gene: SCO1580: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*2
Streptomyces griseus subsp. griseus NBRC 13350 Site: position = -57 score = 3.79471 sequence = CTTTGCATAAAAGTGCGCCG Site: position = -37 score = 4.49862 sequence = CTGCGTATAGTCATGCCATC Gene: SGR_5960: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) Gene: SGR_3479: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Streptomyces scabiei 87.22 Site: position = -35 score = 4.58836 sequence = AAACGTATAGTCATGCCATC Site: position = -55 score = 4.22732 sequence = GATTGCATAAACGTGCAGCG Gene: SCAB_74201: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
| argJ |
2
Streptomyces avermitilis MA-4680 Gene: SAV_6764: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) Gene: SAV_3684: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) |
Gene: SCO1579: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) |
Gene: SGR_5961: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) |
Gene: SCAB_74211: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) |
Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) |
| argB |
Gene: SAV_6765: Acetylglutamate kinase (EC 2.7.2.8) |
Gene: SCO1578: Acetylglutamate kinase (EC 2.7.2.8) |
2
Streptomyces griseus subsp. griseus NBRC 13350 Gene: SGR_5962: Acetylglutamate kinase (EC 2.7.2.8) Gene: SGR_3480: Acetylglutamate kinase (EC 2.7.2.8) |
Gene: SCAB_74221: Acetylglutamate kinase (EC 2.7.2.8) |
Acetylglutamate kinase (EC 2.7.2.8) |
| argD |
Gene: SAV_6766: Acetylornithine aminotransferase (EC 2.6.1.11) |
Gene: SCO1577: Acetylornithine aminotransferase (EC 2.6.1.11) |
Gene: SGR_5963: Acetylornithine aminotransferase (EC 2.6.1.11) |
Gene: SCAB_74231: Acetylornithine aminotransferase (EC 2.6.1.11) |
Acetylornithine aminotransferase (EC 2.6.1.11) |
| argR |
Gene: SAV_6767: Arginine metabolism transcriptional regulator ArgR, ArgR family |
Gene: SCO1576: Arginine metabolism transcriptional regulator ArgR, ArgR family |
Gene: SGR_5964: Arginine metabolism transcriptional regulator ArgR, ArgR family |
Gene: SCAB_74241: Arginine metabolism transcriptional regulator ArgR, ArgR family |
Arginine metabolism transcriptional regulator ArgR, ArgR family |
| CRON 4. | |||||
| SCO2628 |
*
Streptomyces avermitilis MA-4680 Site: position = -28 score = 3.92712 sequence = CAGTGCAAGATCCTGCAGGA Gene: SAV_3165: Predicted transcriptional regulator, LuxR family |
*
Streptomyces coelicolor A3(2) Site: position = -42 score = 5.11436 sequence = TGTGGCATGATCATGCATTG Gene: SCO2686: Predicted transcriptional regulator, LuxR family |
Gene: SGR_2482: Predicted transcriptional regulator, LuxR family |
|
Predicted transcriptional regulator, LuxR family |
| CRON 5. | |||||
| cpdB |
Gene: SAV_6215: 2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16) |
*
Streptomyces coelicolor A3(2) Site: position = -178 score = 3.59679 sequence = CCACGCATGACCACTCAACA Gene: SCO2015: 2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16) |
Gene: SGR_5514: 2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16) |
Gene: SCAB_68841: 2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16) |
2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |