Regulog ArgR - Nocardiaceae
| Regulator type: | Transcription factor |
| Regulator family: | ArgR |
| Regulation mode: | repressor (activator) |
| Biological process: | Arginine biosynthesis |
| Effector: | Arginine |
| Phylum: | Actinobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - ArgR
- By taxonomy - Nocardiaceae
- By TF family - ArgR
- By effector - Arginine
- By pathway - Arginine biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Nocardia farcinica IFM 10152 | 8 | 2 |
| Rhodococcus erythropolis PR4 | 8 | 1 |
| Rhodococcus opacus B4 | 8 | 1 |
| Rhodococcus sp. RHA1 | 8 | 1 |
| Genes | Function | ||||
|---|---|---|---|---|---|
| CRON 1. | |||||
| argC |
*
Nocardia farcinica IFM 10152 Site: position = -26 score = 5.7788 sequence = CTTGCACAATCGTGCATA Gene: nfa19360: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Rhodococcus erythropolis PR4 Site: position = -27 score = 5.75572 sequence = GATGCACAATGATGCATA Gene: RER_32840: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Rhodococcus opacus B4 Site: position = -27 score = 6.03863 sequence = CTTGCATGATGATGCATA Gene: ROP_06870: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Rhodococcus sp. RHA1 Site: position = -27 score = 6.03863 sequence = CTTGCATGATGATGCATA Gene: RHA1_ro00956: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
| argJ |
Gene: nfa19370: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) |
Gene: RER_32830: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) |
Gene: ROP_06860: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) |
Gene: RHA1_ro00955: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) |
Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) |
| argB |
Gene: nfa19380: Acetylglutamate kinase (EC 2.7.2.8) |
Gene: RER_32820: Acetylglutamate kinase (EC 2.7.2.8) |
Gene: ROP_06850: Acetylglutamate kinase (EC 2.7.2.8) |
Gene: RHA1_ro00954: Acetylglutamate kinase (EC 2.7.2.8) |
Acetylglutamate kinase (EC 2.7.2.8) |
| argD |
Gene: nfa19390: Acetylornithine aminotransferase (EC 2.6.1.11) |
Gene: RER_32810: Acetylornithine aminotransferase (EC 2.6.1.11) |
Gene: ROP_06840: Acetylornithine aminotransferase (EC 2.6.1.11) |
Gene: RHA1_ro00953: Acetylornithine aminotransferase (EC 2.6.1.11) |
Acetylornithine aminotransferase (EC 2.6.1.11) |
| argF |
Gene: nfa19400: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Gene: RER_32800: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Gene: ROP_06830: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Gene: RHA1_ro00952: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Ornithine carbamoyltransferase (EC 2.1.3.3) |
| argR |
Gene: nfa19410: Arginine metabolism transcriptional regulator ArgR, ArgR family |
Gene: RER_32790: Arginine metabolism transcriptional regulator ArgR, ArgR family |
Gene: ROP_06820: Arginine metabolism transcriptional regulator ArgR, ArgR family |
Gene: RHA1_ro00951: Arginine metabolism transcriptional regulator ArgR, ArgR family |
Arginine metabolism transcriptional regulator ArgR, ArgR family |
| argG |
*
Nocardia farcinica IFM 10152 Site: position = -149 score = 5.79923 sequence = ATTGCATCATCGTGCATA Gene: nfa19620: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: RER_32780: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: ROP_06810: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: RHA1_ro00950: Argininosuccinate synthase (EC 6.3.4.5) |
Argininosuccinate synthase (EC 6.3.4.5) |
| argH |
Gene: nfa19630: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: RER_32770: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: ROP_06800: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: RHA1_ro00949: Argininosuccinate lyase (EC 4.3.2.1) |
Argininosuccinate lyase (EC 4.3.2.1) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |