Regulog ArgR - Nocardiaceae

Properties
Regulator type:	Transcription factor
Regulator family:	ArgR
Regulation mode:	repressor (activator)
Biological process:	Arginine biosynthesis
Effector:	Arginine
Phylum:	Actinobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 5 sites [see more]

Member of regulog collections

By trascription factor - ArgR
By taxonomy - Nocardiaceae
By TF family - ArgR
By effector - Arginine
By pathway - Arginine biosynthesis

Statistics of regulated genes
Genome	Genes	Operons
Nocardia farcinica IFM 10152	8	2
Rhodococcus erythropolis PR4	8	1
Rhodococcus opacus B4	8	1
Rhodococcus sp. RHA1	8	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes					Function

CRON 1.
argC	* Nocardia farcinica IFM 10152 Site: position = -26 score = 5.7788 sequence = CTTGCACAATCGTGCATA Gene: nfa19360: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	* Rhodococcus erythropolis PR4 Site: position = -27 score = 5.75572 sequence = GATGCACAATGATGCATA Gene: RER_32840: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	* Rhodococcus opacus B4 Site: position = -27 score = 6.03863 sequence = CTTGCATGATGATGCATA Gene: ROP_06870: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	* Rhodococcus sp. RHA1 Site: position = -27 score = 6.03863 sequence = CTTGCATGATGATGCATA Gene: RHA1_ro00956: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)
argJ	Nocardia farcinica IFM 10152 Gene: nfa19370: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1)	Rhodococcus erythropolis PR4 Gene: RER_32830: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1)	Rhodococcus opacus B4 Gene: ROP_06860: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1)	Rhodococcus sp. RHA1 Gene: RHA1_ro00955: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1)	Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1)
argB	Nocardia farcinica IFM 10152 Gene: nfa19380: Acetylglutamate kinase (EC 2.7.2.8)	Rhodococcus erythropolis PR4 Gene: RER_32820: Acetylglutamate kinase (EC 2.7.2.8)	Rhodococcus opacus B4 Gene: ROP_06850: Acetylglutamate kinase (EC 2.7.2.8)	Rhodococcus sp. RHA1 Gene: RHA1_ro00954: Acetylglutamate kinase (EC 2.7.2.8)	Acetylglutamate kinase (EC 2.7.2.8)
argD	Nocardia farcinica IFM 10152 Gene: nfa19390: Acetylornithine aminotransferase (EC 2.6.1.11)	Rhodococcus erythropolis PR4 Gene: RER_32810: Acetylornithine aminotransferase (EC 2.6.1.11)	Rhodococcus opacus B4 Gene: ROP_06840: Acetylornithine aminotransferase (EC 2.6.1.11)	Rhodococcus sp. RHA1 Gene: RHA1_ro00953: Acetylornithine aminotransferase (EC 2.6.1.11)	Acetylornithine aminotransferase (EC 2.6.1.11)
argF	Nocardia farcinica IFM 10152 Gene: nfa19400: Ornithine carbamoyltransferase (EC 2.1.3.3)	Rhodococcus erythropolis PR4 Gene: RER_32800: Ornithine carbamoyltransferase (EC 2.1.3.3)	Rhodococcus opacus B4 Gene: ROP_06830: Ornithine carbamoyltransferase (EC 2.1.3.3)	Rhodococcus sp. RHA1 Gene: RHA1_ro00952: Ornithine carbamoyltransferase (EC 2.1.3.3)	Ornithine carbamoyltransferase (EC 2.1.3.3)
argR	Nocardia farcinica IFM 10152 Gene: nfa19410: Arginine metabolism transcriptional regulator ArgR, ArgR family	Rhodococcus erythropolis PR4 Gene: RER_32790: Arginine metabolism transcriptional regulator ArgR, ArgR family	Rhodococcus opacus B4 Gene: ROP_06820: Arginine metabolism transcriptional regulator ArgR, ArgR family	Rhodococcus sp. RHA1 Gene: RHA1_ro00951: Arginine metabolism transcriptional regulator ArgR, ArgR family	Arginine metabolism transcriptional regulator ArgR, ArgR family
argG	* Nocardia farcinica IFM 10152 Site: position = -149 score = 5.79923 sequence = ATTGCATCATCGTGCATA Gene: nfa19620: Argininosuccinate synthase (EC 6.3.4.5)	Rhodococcus erythropolis PR4 Gene: RER_32780: Argininosuccinate synthase (EC 6.3.4.5)	Rhodococcus opacus B4 Gene: ROP_06810: Argininosuccinate synthase (EC 6.3.4.5)	Rhodococcus sp. RHA1 Gene: RHA1_ro00950: Argininosuccinate synthase (EC 6.3.4.5)	Argininosuccinate synthase (EC 6.3.4.5)
argH	Nocardia farcinica IFM 10152 Gene: nfa19630: Argininosuccinate lyase (EC 4.3.2.1)	Rhodococcus erythropolis PR4 Gene: RER_32770: Argininosuccinate lyase (EC 4.3.2.1)	Rhodococcus opacus B4 Gene: ROP_06800: Argininosuccinate lyase (EC 4.3.2.1)	Rhodococcus sp. RHA1 Gene: RHA1_ro00949: Argininosuccinate lyase (EC 4.3.2.1)	Argininosuccinate lyase (EC 4.3.2.1)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog ArgR - Nocardiaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --