Regulog Bpro_5165 - Comamonadaceae

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum:	Proteobacteria/Beta
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 1 sites [see more]

Member of regulog collections

By taxonomy - Comamonadaceae
By TF family - GntR/MocR

Statistics of regulated genes
Genome	Genes	Operons
Acidovorax avenae subsp. citrulli AAC00-1
Acidovorax sp. JS42
Comamonas testosteroni KF-1
Delftia acidovorans SPH-1
Leptothrix cholodnii SP-6
Methylibium petroleiphilum PM1
Polaromonas naphthalenivorans CJ2
Polaromonas sp. JS666	2	1
Rhodoferax ferrireducens DSM 15236
Variovorax paradoxus S110
Verminephrobacter eiseniae EF01-2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes												Function

CRON 1.
COG1573	Acidovorax avenae subsp. citrulli AAC00-1 Gene: Aave_1872: Uracil-DNA glycosylase superfamily protein	Acidovorax sp. JS42 Gene: Ajs_3380: Uracil-DNA glycosylase superfamily protein	Comamonas testosteroni KF-1	Delftia acidovorans SPH-1	Leptothrix cholodnii SP-6	Methylibium petroleiphilum PM1	Polaromonas naphthalenivorans CJ2	* Polaromonas sp. JS666 Site: position = -172 score = 6.73847 sequence = TTGTGGTGCA-(14)-CTTTGATGCT Gene: Bpro_5163: Uracil-DNA glycosylase superfamily protein	Rhodoferax ferrireducens DSM 15236 Gene: Rfer_4129: Uracil-DNA glycosylase superfamily protein	Variovorax paradoxus S110 Gene: Vapar_0123: Uracil-DNA glycosylase superfamily protein	Verminephrobacter eiseniae EF01-2	Uracil-DNA glycosylase superfamily protein
cog3189	Acidovorax avenae subsp. citrulli AAC00-1	Acidovorax sp. JS42 Gene: Ajs_3379: Uncharacterized conserved protein	Comamonas testosteroni KF-1 Gene: CtesDRAFT_1203: Uncharacterized conserved protein	Delftia acidovorans SPH-1 Gene: Daci_3691: Uncharacterized conserved protein	Leptothrix cholodnii SP-6	Methylibium petroleiphilum PM1	Polaromonas naphthalenivorans CJ2	2 Polaromonas sp. JS666 Gene: Bpro_2981: Uncharacterized conserved protein Gene: Bpro_5164: Uncharacterized conserved protein	2 Rhodoferax ferrireducens DSM 15236 Gene: Rfer_4116: Uncharacterized conserved protein Gene: Rfer_4130: Uncharacterized conserved protein	Variovorax paradoxus S110 Gene: Vapar_2232: Uncharacterized conserved protein	Verminephrobacter eiseniae EF01-2	Uncharacterized conserved protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog Bpro_5165 - Comamonadaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --