Regulog H16_B0275 - Ralstonia

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum:	Proteobacteria/Beta
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 3 sites [see more]

Member of regulog collections

By taxonomy - Ralstonia
By TF family - GntR/MocR

Statistics of regulated genes
Genome	Genes	Operons
Cupriavidus taiwanensis
Ralstonia eutropha H16	2	1
Ralstonia eutropha JMP134	4	2
Ralstonia metallidurans CH34
Ralstonia pickettii 12J
Ralstonia solanacearum GMI1000

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes							Function

CRON 1.
PF01966	Cupriavidus taiwanensis	Ralstonia eutropha H16	* Ralstonia eutropha JMP134 Site: position = -176 score = 6.94182 sequence = CAATAGTACA-(14)-TCTTGGGTCT Gene: Reut_C6136: Metal-dependent phosphohydrolase, HD subdomain	Ralstonia metallidurans CH34	Ralstonia pickettii 12J	Ralstonia solanacearum GMI1000	Metal-dependent phosphohydrolase, HD subdomain
COG1028	Cupriavidus taiwanensis	Ralstonia eutropha H16	Ralstonia eutropha JMP134 Gene: Reut_C6137: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)	Ralstonia metallidurans CH34	Ralstonia pickettii 12J	Ralstonia solanacearum GMI1000	Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

CRON 2.
COG1917	Cupriavidus taiwanensis	2 Ralstonia eutropha H16* Site: position = -84 score = 8.33893 sequence = CTCTGGTACA-(14)-TTTTGGTTCT Gene: H16_B0276: Uncharacterized conserved protein, contains double-stranded beta-helix domain Gene: H16_A1751: Uncharacterized conserved protein, contains double-stranded beta-helix domain	* Ralstonia eutropha JMP134 Site: position = -89 score = 10.3266 sequence = TCTTGGTACA-(14)-TCCTGGTGCT Gene: Reut_C6134: Uncharacterized conserved protein, contains double-stranded beta-helix domain	Ralstonia metallidurans CH34	Ralstonia pickettii 12J	Ralstonia solanacearum GMI1000	Uncharacterized conserved protein, contains double-stranded beta-helix domain
COG2128	Cupriavidus taiwanensis	2 Ralstonia eutropha H16 Gene: H16_B0277: Uncharacterized conserved protein Gene: H16_A1750: Uncharacterized conserved protein	Ralstonia eutropha JMP134 Gene: Reut_C6133: Uncharacterized conserved protein	Ralstonia metallidurans CH34	Ralstonia pickettii 12J	Ralstonia solanacearum GMI1000	Uncharacterized conserved protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog H16_B0275 - Ralstonia

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --