Regulog H16_B0275 - Ralstonia
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | |
| Effector: | |
| Phylum: | Proteobacteria/Beta |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
| Genome | Genes | Operons |
|---|---|---|
| Cupriavidus taiwanensis | ||
| Ralstonia eutropha H16 | 2 | 1 |
| Ralstonia eutropha JMP134 | 4 | 2 |
| Ralstonia metallidurans CH34 | ||
| Ralstonia pickettii 12J | ||
| Ralstonia solanacearum GMI1000 |
| Genes | Function | ||||||
|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||
| PF01966 |
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Ralstonia eutropha JMP134 Site: position = -176 score = 6.94182 sequence = CAATAGTACA-(14)-TCTTGGGTCT Gene: Reut_C6136: Metal-dependent phosphohydrolase, HD subdomain |
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Metal-dependent phosphohydrolase, HD subdomain |
| COG1028 |
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Gene: Reut_C6137: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
| CRON 2. | |||||||
| COG1917 |
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*2
Ralstonia eutropha H16 Site: position = -84 score = 8.33893 sequence = CTCTGGTACA-(14)-TTTTGGTTCT Gene: H16_B0276: Uncharacterized conserved protein, contains double-stranded beta-helix domain Gene: H16_A1751: Uncharacterized conserved protein, contains double-stranded beta-helix domain |
*
Ralstonia eutropha JMP134 Site: position = -89 score = 10.3266 sequence = TCTTGGTACA-(14)-TCCTGGTGCT Gene: Reut_C6134: Uncharacterized conserved protein, contains double-stranded beta-helix domain |
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Uncharacterized conserved protein, contains double-stranded beta-helix domain |
| COG2128 |
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2
Ralstonia eutropha H16 Gene: H16_B0277: Uncharacterized conserved protein Gene: H16_A1750: Uncharacterized conserved protein |
Gene: Reut_C6133: Uncharacterized conserved protein |
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Uncharacterized conserved protein |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |