Regulog PdxQ3 - Rhizobiales

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Pyridoxine/pyridoxal homeostasis
Effector:
Phylum:	Proteobacteria/Alpha
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 3 sites [see more]

Member of regulog collections

By taxonomy - Rhizobiales
By TF family - GntR/MocR
By pathway - Pyridoxine/pyridoxal homeostasis

Statistics of regulated genes
Genome	Genes	Operons
Agrobacterium tumefaciens str. C58 (Cereon)
Azorhizobium caulinodans ORS 571	1	1
Bartonella quintana str. Toulouse
Bradyrhizobium japonicum USDA 110	1	1
Bradyrhizobium sp. BTAi1	2	1
Brucella melitensis 16M
Mesorhizobium loti MAFF303099
Mesorhizobium sp. BNC1
Nitrobacter winogradskyi Nb-255
Rhizobium etli CFN 42
Rhizobium leguminosarum bv. viciae 3841
Rhizobium sp. NGR234
Rhodopseudomonas palustris CGA009
Sinorhizobium meliloti 1021
Xanthobacter autotrophicus Py2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes																Function

CRON 1.
COG5457	Agrobacterium tumefaciens str. C58 (Cereon) Gene: Atu1847: Uncharacterized conserved small protein	* Azorhizobium caulinodans ORS 571 Site: position = -98 score = 10.7321 sequence = ATTGCTCC-(1)-AGTGCAAT-(6)-ATTGCGCT Gene: AZC_4466: Uncharacterized conserved small protein	Bartonella quintana str. Toulouse	* Bradyrhizobium japonicum USDA 110 Site: position = -107 score = 10.7919 sequence = ATTGCACC-(1)-AGAGCAAT-(6)-CTTGCTCC Gene: bll5859: Uncharacterized conserved small protein	* Bradyrhizobium sp. BTAi1 Site: position = -150 score = 11.5307 sequence = ATTGCACC-(1)-AGAGCAAT-(6)-ATTGCACC Gene: BBta_6781: Uncharacterized conserved small protein	Brucella melitensis 16M	2 Mesorhizobium loti MAFF303099 Gene: msr0060: Uncharacterized conserved small protein Gene: msr3036: Uncharacterized conserved small protein	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42 Gene: RHE_CH02283: Uncharacterized conserved small protein	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009	Sinorhizobium meliloti 1021 Gene: SMc00491: Uncharacterized conserved small protein	Xanthobacter autotrophicus Py2	Uncharacterized conserved small protein
PF02567	Agrobacterium tumefaciens str. C58 (Cereon) Gene: Atu4269: Phenazine biosynthesis PhzC/PhzF protein	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1 Gene: BBta_6782: Phenazine biosynthesis PhzC/PhzF protein	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	Phenazine biosynthesis PhzC/PhzF protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog PdxQ3 - Rhizobiales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --