Regulog PdxQ3 - Rhizobiales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Pyridoxine/pyridoxal homeostasis |
| Effector: | |
| Phylum: | Proteobacteria/Alpha |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhizobiales
- By TF family - GntR/MocR
- By pathway - Pyridoxine/pyridoxal homeostasis
| Genome | Genes | Operons |
|---|---|---|
| Agrobacterium tumefaciens str. C58 (Cereon) | ||
| Azorhizobium caulinodans ORS 571 | 1 | 1 |
| Bartonella quintana str. Toulouse | ||
| Bradyrhizobium japonicum USDA 110 | 1 | 1 |
| Bradyrhizobium sp. BTAi1 | 2 | 1 |
| Brucella melitensis 16M | ||
| Mesorhizobium loti MAFF303099 | ||
| Mesorhizobium sp. BNC1 | ||
| Nitrobacter winogradskyi Nb-255 | ||
| Rhizobium etli CFN 42 | ||
| Rhizobium leguminosarum bv. viciae 3841 | ||
| Rhizobium sp. NGR234 | ||
| Rhodopseudomonas palustris CGA009 | ||
| Sinorhizobium meliloti 1021 | ||
| Xanthobacter autotrophicus Py2 |
| Genes | Function | |||||||||||||||
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| CRON 1. | ||||||||||||||||
| COG5457 |
Gene: Atu1847: Uncharacterized conserved small protein |
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Azorhizobium caulinodans ORS 571 Site: position = -98 score = 10.7321 sequence = ATTGCTCC-(1)-AGTGCAAT-(6)-ATTGCGCT Gene: AZC_4466: Uncharacterized conserved small protein |
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Bradyrhizobium japonicum USDA 110 Site: position = -107 score = 10.7919 sequence = ATTGCACC-(1)-AGAGCAAT-(6)-CTTGCTCC Gene: bll5859: Uncharacterized conserved small protein |
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Bradyrhizobium sp. BTAi1 Site: position = -150 score = 11.5307 sequence = ATTGCACC-(1)-AGAGCAAT-(6)-ATTGCACC Gene: BBta_6781: Uncharacterized conserved small protein |
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Mesorhizobium loti MAFF303099 Gene: msr0060: Uncharacterized conserved small protein Gene: msr3036: Uncharacterized conserved small protein |
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Gene: RHE_CH02283: Uncharacterized conserved small protein |
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Gene: SMc00491: Uncharacterized conserved small protein |
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Uncharacterized conserved small protein |
| PF02567 |
Gene: Atu4269: Phenazine biosynthesis PhzC/PhzF protein |
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Gene: BBta_6782: Phenazine biosynthesis PhzC/PhzF protein |
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Phenazine biosynthesis PhzC/PhzF protein |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |