Regulog PdxQ3 - Rhodobacterales

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Metabolite transport; Pyridoxine/pyridoxal homeostasis
Effector:
Phylum:	Proteobacteria/Alpha
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 2 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Hyphomonas neptunium ATCC 15444
Jannaschia sp. CCS1
Loktanella vestfoldensis SKA53
Oceanicaulis alexandrii HTCC2633
Oceanicola batsensis HTCC2597
Oceanicola granulosus HTCC2516
Paracoccus denitrificans PD1222
Rhodobacter sphaeroides 2.4.1
Rhodobacterales bacterium HTCC2654
Roseobacter sp. MED193
Roseovarius nubinhibens ISM	1	1
Roseovarius sp. 217
Silicibacter TM1040
Silicibacter pomeroyi DSS-3	1	1
Sulfitobacter sp. EE-36

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes																Function

CRON 1.
PF07690	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1	Loktanella vestfoldensis SKA53	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	* Roseovarius nubinhibens ISM Site: position = -91 score = 11.6069 sequence = GCTGTCCT-(1)-AGGACAAT-(6)-ATTGTCAT Gene: ISM_17230: putative transporter, major facilitator transporter family	Roseovarius sp. 217	Silicibacter TM1040	* Silicibacter pomeroyi DSS-3 Site: position = -83 score = 10.6167 sequence = AGCGTACT-(1)-GATACAAT-(6)-ATTGTACT Gene: SPOA0148: putative transporter, major facilitator transporter family	Sulfitobacter sp. EE-36	putative transporter, major facilitator transporter family

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --