Regulog PdxQ3 - Burkholderia

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Metabolite transport; Pyridoxine/pyridoxal homeostasis
Effector:
Phylum:	Proteobacteria/Beta
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 3 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Burkholderia cepacia AMMD
Burkholderia glumae BGR1
Burkholderia mallei ATCC 23344
Burkholderia phymatum STM815	1	1
Burkholderia pseudomallei K96243	1	1
Burkholderia sp. 383	1	1
Burkholderia vietnamiensis G4
Burkholderia xenovorans LB400

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes									Function

CRON 1.
COG0730	Burkholderia cepacia AMMD	Burkholderia glumae BGR1	Burkholderia mallei ATCC 23344	Burkholderia phymatum STM815	Burkholderia pseudomallei K96243	* Burkholderia sp. 383 Site: position = -266 score = 8.60182 sequence = ATTGCACC-(1)-AGGTCAAT-(6)-ATTGCACT Gene: Bcep18194_C7709: Predicted permeases	Burkholderia vietnamiensis G4	Burkholderia xenovorans LB400	Predicted permeases

CRON 2.
PF01965	Burkholderia cepacia AMMD	Burkholderia glumae BGR1	Burkholderia mallei ATCC 23344	* Burkholderia phymatum STM815 Site: position = -82 score = 12.4317 sequence = GATGTATT-(1)-ATGACAAT-(6)-ATTGTAAT Gene: Bphy_5570: ThiJ/PfpI domain-containing protein	* Burkholderia pseudomallei K96243 Site: position = -85 score = 13.5869 sequence = GATGTATC-(1)-ATGACAAT-(6)-ATTGTATT Gene: BPSS0450: ThiJ/PfpI domain-containing protein	Burkholderia sp. 383 Gene: Bcep18194_C7256: ThiJ/PfpI domain-containing protein	Burkholderia vietnamiensis G4	Burkholderia xenovorans LB400	ThiJ/PfpI domain-containing protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --