Regulog Daci_1890 - Comamonadaceae
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | |
| Effector: | |
| Phylum: | Proteobacteria/Beta |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Comamonadaceae
- By TF family - GntR/MocR
| Genome | Genes | Operons |
|---|---|---|
| Acidovorax avenae subsp. citrulli AAC00-1 | ||
| Acidovorax sp. JS42 | ||
| Comamonas testosteroni KF-1 | 1 | 1 |
| Delftia acidovorans SPH-1 | 1 | 1 |
| Polaromonas naphthalenivorans CJ2 | ||
| Polaromonas sp. JS666 | ||
| Variovorax paradoxus S110 | ||
| Verminephrobacter eiseniae EF01-2 | ||
| Methylibium petroleiphilum PM1 | ||
| Leptothrix cholodnii SP-6 | ||
| Rhodoferax ferrireducens DSM 15236 |
| Genes | Function | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||
| COG697 |
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Comamonas testosteroni KF-1 Site: position = -107 score = 11.2746 sequence = TTCTGTACTGG-(7)-TGAATACAGTT-(6)-AACTGTGCTGT Gene: CtesDRAFT_0888: Permease of the drug/metabolite transporter (DMT) superfamily, COG697(RhaT) |
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Delftia acidovorans SPH-1 Site: position = -111 score = 13.4247 sequence = TTCTGTAGTGG-(8)-GCATAACAGTT-(6)-AATTGTATTGG Gene: Daci_1891: Permease of the drug/metabolite transporter (DMT) superfamily, COG697(RhaT) |
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Permease of the drug/metabolite transporter (DMT) superfamily, COG697(RhaT) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |