Regulog Daci_1890 - Comamonadaceae

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum:	Proteobacteria/Beta
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 2 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Acidovorax avenae subsp. citrulli AAC00-1
Acidovorax sp. JS42
Comamonas testosteroni KF-1	1	1
Delftia acidovorans SPH-1	1	1
Polaromonas naphthalenivorans CJ2
Polaromonas sp. JS666
Variovorax paradoxus S110
Verminephrobacter eiseniae EF01-2
Methylibium petroleiphilum PM1
Leptothrix cholodnii SP-6
Rhodoferax ferrireducens DSM 15236

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes												Function

CRON 1.
COG697	Acidovorax avenae subsp. citrulli AAC00-1	Acidovorax sp. JS42	* Comamonas testosteroni KF-1 Site: position = -107 score = 11.2746 sequence = TTCTGTACTGG-(7)-TGAATACAGTT-(6)-AACTGTGCTGT Gene: CtesDRAFT_0888: Permease of the drug/metabolite transporter (DMT) superfamily, COG697(RhaT)	* Delftia acidovorans SPH-1 Site: position = -111 score = 13.4247 sequence = TTCTGTAGTGG-(8)-GCATAACAGTT-(6)-AATTGTATTGG Gene: Daci_1891: Permease of the drug/metabolite transporter (DMT) superfamily, COG697(RhaT)	Polaromonas naphthalenivorans CJ2	Polaromonas sp. JS666	Variovorax paradoxus S110	Verminephrobacter eiseniae EF01-2	Methylibium petroleiphilum PM1	Leptothrix cholodnii SP-6	Rhodoferax ferrireducens DSM 15236	Permease of the drug/metabolite transporter (DMT) superfamily, COG697(RhaT)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --