Regulog PP2948 - Pseudomonadaceae

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum:	Proteobacteria/Gamma
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 2 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Azotobacter vinelandii AvOP	1	1
Pseudomonas aeruginosa PAO1
Pseudomonas entomophila L48
Pseudomonas fluorescens Pf-5
Pseudomonas mendocina ymp
Pseudomonas putida KT2440	1	1
Pseudomonas stutzeri A1501
Pseudomonas syringae pv. tomato str. DC3000

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes									Function

CRON 1.
COG697	* Azotobacter vinelandii AvOP Site: position = -110 score = 13.7643 sequence = AACTGTACTGG-(8)-ACATAACAGTT-(6)-AATTGTGTTGG Gene: Avin_48150: Permease of the drug/metabolite transporter (DMT) superfamily, COG697(RhaT)	Pseudomonas aeruginosa PAO1	Pseudomonas entomophila L48	Pseudomonas fluorescens Pf-5 Gene: PFL_2405: Permease of the drug/metabolite transporter (DMT) superfamily, COG697(RhaT)	Pseudomonas mendocina ymp	* Pseudomonas putida KT2440 Site: position = -112 score = 13.6386 sequence = AACTGTGCTGG-(8)-GCATAACAGTT-(6)-AAGTGTATTGG Gene: PP2949: Permease of the drug/metabolite transporter (DMT) superfamily, COG697(RhaT)	Pseudomonas stutzeri A1501	Pseudomonas syringae pv. tomato str. DC3000	Permease of the drug/metabolite transporter (DMT) superfamily, COG697(RhaT)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --