Regulog PP2948 - Pseudomonadaceae
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | |
| Effector: | |
| Phylum: | Proteobacteria/Gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Pseudomonadaceae
- By TF family - GntR/MocR
| Genome | Genes | Operons |
|---|---|---|
| Azotobacter vinelandii AvOP | 1 | 1 |
| Pseudomonas aeruginosa PAO1 | ||
| Pseudomonas entomophila L48 | ||
| Pseudomonas fluorescens Pf-5 | ||
| Pseudomonas mendocina ymp | ||
| Pseudomonas putida KT2440 | 1 | 1 |
| Pseudomonas stutzeri A1501 | ||
| Pseudomonas syringae pv. tomato str. DC3000 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| COG697 |
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Azotobacter vinelandii AvOP Site: position = -110 score = 13.7643 sequence = AACTGTACTGG-(8)-ACATAACAGTT-(6)-AATTGTGTTGG Gene: Avin_48150: Permease of the drug/metabolite transporter (DMT) superfamily, COG697(RhaT) |
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Gene: PFL_2405: Permease of the drug/metabolite transporter (DMT) superfamily, COG697(RhaT) |
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Pseudomonas putida KT2440 Site: position = -112 score = 13.6386 sequence = AACTGTGCTGG-(8)-GCATAACAGTT-(6)-AAGTGTATTGG Gene: PP2949: Permease of the drug/metabolite transporter (DMT) superfamily, COG697(RhaT) |
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Permease of the drug/metabolite transporter (DMT) superfamily, COG697(RhaT) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |